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AT1G15050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : indole-3-acetic acid inducible 34
Curator
Summary (TAIR10)
Belongs to auxin inducible gene family.
Computational
Description (TAIR10)
indole-3-acetic acid inducible 34 (IAA34); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 32 (TAIR:AT2G01200.2); Has 1472 Blast hits to 1472 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1472; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:23310DNASU:838070eggNOG:ENOG410IYRHeggNOG:ENOG4111568EMBL:AC012189EMBL:AF334713EMBL:AJ458327
EMBL:CP002684EnsemblPlants:AT1G15050EnsemblPlants:AT1G15050.1entrez:838070ExpressionAtlas:Q9C5X0GeneID:838070Genevisible:Q9C5X0
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009733GO:GO:0009734Gramene:AT1G15050.1hmmpanther:PTHR31734
hmmpanther:PTHR31734:SF29HOGENOM:HOG000090886InParanoid:Q9C5X0IntAct:Q9C5X0InterPro:IPR000270InterPro:IPR003311InterPro:IPR033389
KEGG:ath:AT1G15050KO:K14484OMA:DVPWNEFPANTHER:PTHR31734PaxDb:Q9C5X0Pfam:PF02309Pfam:Q9C5X0
Pfscan:PS51745PhylomeDB:Q9C5X0PIR:B86284PRO:PR:Q9C5X0PROSITE:PS51745ProteinModelPortal:Q9C5X0Proteomes:UP000006548
RefSeq:NP_172959.2SMR:Q9C5X0STRING:3702.AT1G15050.1SUPFAM:SSF54277TAIR:AT1G15050tair10-symbols:IAA34UniGene:At.17166
UniProt:C0SUV5UniProt:Q9C5X0
Coordinates (TAIR10) chr1:-:5182256..5183243
Molecular Weight (calculated) 21406.50 Da
IEP (calculated) 6.95
GRAVY (calculated) -0.51
Length 185 amino acids
Sequence (TAIR10)
(BLAST)
001: MYCSDPPHPL HLVASDKQQK DHKLILSWKK PTMDSDPLGV FPNSPKYHPY YSQTTEFGGV IDLGLSLRTI QHEIYHSSGQ RYCSNEGYRR KWGYVKVTMD
101: GLVVGRKVCV LDHGSYSTLA HQLEDMFGMQ SVSGLRLFQM ESEFCLVYRD EEGLWRNAGD VPWNEFIESV ERLRITRRND AVLPF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)