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AT1G14940.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Polyketide cyclase/dehydrase and lipid transport superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G14930.1); Has 362 Blast hits to 333 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JDFNeggNOG:ENOG41114YVEMBL:AJ306138EMBL:AK229662
EMBL:CP002684EMBL:X91961EnsemblPlants:AT1G14940EnsemblPlants:AT1G14940.1
entrez:838059ExpressionAtlas:Q39133Gene3D:3.30.530.20GeneID:838059
GO:GO:0006952GO:GO:0009607Gramene:AT1G14940.1hmmpanther:PTHR31338
hmmpanther:PTHR31338:SF15HOGENOM:HOG000239987InterPro:IPR000916InterPro:IPR023393
OMA:RSWNITCPfam:PF00407PhylomeDB:Q39133PIR:S71258
ProMEX:Q39133Proteomes:UP000006548RefSeq:NP_172947.1SMART:SM01037
SMR:Q39133STRING:3702.AT1G14940.1SUPFAM:SSF55961TAIR:AT1G14940
UniGene:At.5380UniProt:Q39133
Coordinates (TAIR10) chr1:-:5154775..5155512
Molecular Weight (calculated) 17880.30 Da
IEP (calculated) 7.18
GRAVY (calculated) -0.77
Length 155 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMSGTYVAE VPLKGSAEKH YKKWRNENHV FQDAVGHHIQ GCTMHDGDWD SHGSIRSWNI TCDGKPEVFK EKREIDDEKM ALTLKGLEGQ AMEKYKKYEV
101: IYQFIPKSKE GCVCKITLIW EKRNENSPEP INYMKFVKSL VADMDDHVLN GQNKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)