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AT1G14920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : GRAS family transcription factor family protein
Curator
Summary (TAIR10)
Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.
Computational
Description (TAIR10)
GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:23297DIP:DIP-32985NDisProt:DP00724eggNOG:ENOG410IQYHeggNOG:ENOG410YBFYEMBL:AC006917EMBL:AY058194
EMBL:AY142002EMBL:CP002684EMBL:Y11337EMBL:Y15193EnsemblPlants:AT1G14920EnsemblPlants:AT1G14920.1entrez:838057
EvolutionaryTrace:Q9LQT8GeneID:838057Genevisible:Q9LQT8GO:GO:0000989GO:GO:0003700GO:GO:0005634GO:GO:0006351
GO:GO:0006808GO:GO:0007275GO:GO:0009739GO:GO:0009740GO:GO:0009938GO:GO:0010218GO:GO:0010233
Gramene:AT1G14920.1hmmpanther:PTHR31636hmmpanther:PTHR31636:SF50HOGENOM:HOG000238577InParanoid:Q9LQT8IntAct:Q9LQT8InterPro:IPR005202
InterPro:IPR021914InterPro:IPR030006KEGG:ath:AT1G14920KO:K14494ncoils:CoilOMA:DASCKAKPANTHER:PTHR31636:SF50
PaxDb:Q9LQT8PDB:2ZSHPDB:2ZSIPDBsum:2ZSHPDBsum:2ZSIPfam:PF03514Pfam:PF12041
Pfam:Q9LQT8Pfscan:PS50985PhylomeDB:Q9LQT8PIR:H86282PRIDE:Q9LQT8PRO:PR:Q9LQT8PROSITE:PS50985
ProteinModelPortal:Q9LQT8Proteomes:UP000006548RefSeq:NP_172945.1SMR:Q9LQT8STRING:3702.AT1G14920.1TAIR:AT1G14920tair10-symbols:GAI
tair10-symbols:RGA2UniGene:At.15032UniGene:At.75604UniProt:Q9LQT8
Coordinates (TAIR10) chr1:+:5149414..5151015
Molecular Weight (calculated) 58929.90 Da
IEP (calculated) 5.41
GRAVY (calculated) -0.22
Length 533 amino acids
Sequence (TAIR10)
(BLAST)
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)