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AT1G14687.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : homeobox protein 32
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
homeobox protein 32 (HB32); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 26 (TAIR:AT5G60480.1); Has 531 Blast hits to 458 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 531; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:23273eggNOG:ENOG410JFT6eggNOG:ENOG41115EWEMBL:AC006917EMBL:AY086523EMBL:BT003942EMBL:BT005027
EMBL:CP002684EnsemblPlants:AT1G14687EnsemblPlants:AT1G14687.1entrez:838033Gene3D:1.10.10.60GeneID:838033Genevisible:Q9LQW3
GO:GO:0003677GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0042803GO:GO:0046872Gramene:AT1G14687.1
hmmpanther:PTHR31948hmmpanther:PTHR31948:SF16HOGENOM:HOG000238105InParanoid:Q9LQW3IntAct:Q9LQW3InterPro:IPR006455InterPro:IPR006456
InterPro:IPR009057KEGG:ath:AT1G14687OMA:RSYHRRIPaxDb:Q9LQW3Pfam:PF04770Pfam:Q9LQW3Pfscan:PS51523
PhylomeDB:Q9LQW3PRIDE:Q9LQW3PRO:PR:Q9LQW3ProDom:PD125774PROSITE:PS51523ProteinModelPortal:Q9LQW3Proteomes:UP000006548
RefSeq:NP_563956.1SMR:Q9LQW3STRING:3702.AT1G14687.1SUPFAM:SSF46689TAIR:AT1G14687tair10-symbols:AtHB32tair10-symbols:HB32
tair10-symbols:ZHD14TIGRfam:TIGR01565TIGRfam:TIGR01566TIGRFAMs:TIGR01565TIGRFAMs:TIGR01566UniGene:At.41958UniGene:At.74098
UniProt:Q9LQW3
Coordinates (TAIR10) chr1:+:5048046..5048552
Molecular Weight (calculated) 19923.60 Da
IEP (calculated) 9.44
GRAVY (calculated) -1.01
Length 168 amino acids
Sequence (TAIR10)
(BLAST)
001: MQSTCVYREC MRNHAAKLGS YAIDGCREYS QPSTGDLCVA CGCHRSYHRR IDVISSPQIN HTRFPFTSLR RVKQLARLKW KTAEERNEEE EDDTEETSTE
101: EKMTVQRRRK SKFTAEQREA MKDYAAKLGW TLKDKRALRE EIRVFCEGIG VTRYHFKTWV NNNKKFYH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)