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AT1G14280.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.785
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phytochrome kinase substrate 2
Curator
Summary (TAIR10)
Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism. Forms a complex with Phot1, Phot2 and NPH3.
Computational
Description (TAIR10)
phytochrome kinase substrate 2 (PKS2); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 337 Blast hits to 325 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 6; Plants - 286; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Protein Annotations
BioGrid:23229eggNOG:ENOG410IXAUeggNOG:ENOG4111ACREMBL:AC012188EMBL:AF334730EMBL:AY054676EMBL:AY081531
EMBL:AY088864EMBL:CP002684EnsemblPlants:AT1G14280EnsemblPlants:AT1G14280.1entrez:837989GeneID:837989Genevisible:Q9M9T4
GO:GO:0005886GO:GO:0009585GO:GO:0009638GO:GO:0048366Gramene:AT1G14280.1hmmpanther:PTHR33781hmmpanther:PTHR33781:SF4
HOGENOM:HOG000115571InParanoid:Q9M9T4iPTMnet:Q9M9T4KEGG:ath:AT1G14280OMA:MNRTPSYPaxDb:Q9M9T4Pfam:Q9M9T4
PhylomeDB:Q9M9T4PIR:H86276PRIDE:Q9M9T4PRO:PR:Q9M9T4Proteomes:UP000006548RefSeq:NP_172880.1STRING:3702.AT1G14280.1
TAIR:AT1G14280tair10-symbols:PKS2UniGene:At.12033UniGene:At.74218UniProt:Q9M9T4
Coordinates (TAIR10) chr1:+:4877657..4878985
Molecular Weight (calculated) 49133.40 Da
IEP (calculated) 8.89
GRAVY (calculated) -0.67
Length 442 amino acids
Sequence (TAIR10)
(BLAST)
001: MVTLTSSSST PNVSFDFMMN NNNNSNNLYG PFSSSSTSFS YLTSKEDALT QKNLMSGITN DVLGINKKAS EDLEISVFGA EKYFNGDMDS DHSPRLVSPL
101: PDPEVPIERI FVGPKQSSKN SSETPSLRSE SSWNSQSLLL QSKYVEKKKN IKKNSSCNSY FQEKDMSSNH KVSNKKSFLA TLGCRCVCSN WSSVDVVDDK
201: RRSSGLKKIK TQLSFSGDLS SEMKIHQQQQ EAMLEQRKSL EIFGSPLIEK RIIQKKFPWE YSSSAKKEEH GFSVKYEEEE DGSVSDVSTD LFEIESLTGK
301: ANPFLARQGS SDPDSPDGYA PSEVSIQWSV VTASVADFSV MSECATSPVK KNRSFQIPRI PIMAKSNREI APQRRKSSSS GLLMGCKSHK SVRVSGDSYT
401: SMNRTPSYVP RFPVEANPTS TETRRRISSS SVSHTQSPFL YT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)