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AT1G14150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : PsbQ-like 2
Curator
Summary (TAIR10)
Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.
Computational
Description (TAIR10)
PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit Q-2 (TAIR:AT4G05180.1); Has 142 Blast hits to 142 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G14150-MONOMEReggNOG:ENOG410IY1ReggNOG:ENOG410YK3KEMBL:AC007576
EMBL:AF083742EMBL:AF370579EMBL:AK229642EMBL:AY088325
EMBL:CP002684EnsemblPlants:AT1G14150EnsemblPlants:AT1G14150.1entrez:837974
Gene3D:1.20.120.290GeneID:837974Genevisible:Q9XI73GO:GO:0005509
GO:GO:0006810GO:GO:0009344GO:GO:0009507GO:GO:0009534
GO:GO:0009535GO:GO:0009543GO:GO:0009654GO:GO:0009767
GO:GO:0019898GO:GO:0045156gramene_pathway:1.10.3.2gramene_pathway:PWY-101
hmmpanther:PTHR33399hmmpanther:PTHR33399:SF5HOGENOM:HOG000006297InParanoid:Q9XI73
InterPro:IPR008797InterPro:IPR023222KEGG:ath:AT1G14150KO:K08901
OMA:MAEFDYYPaxDb:Q9XI73Pfam:PF05757Pfam:Q9XI73
PhylomeDB:Q9XI73PIR:A86275PRIDE:Q9XI73PRO:PR:Q9XI73
ProteinModelPortal:Q9XI73Proteomes:UP000006548RefSeq:NP_563937.1RefSeq:NP_973820.1
SMR:Q9XI73STRING:3702.AT1G14150.1SUPFAM:0048472SUPFAM:SSF101112
TAIR:AT1G14150tair10-symbols:PQL1tair10-symbols:PQL2TCDB:3.D.1.8.1
UniGene:At.46769UniGene:At.47475UniProt:Q9XI73
Coordinates (TAIR10) chr1:+:4839885..4840632
Molecular Weight (calculated) 22158.60 Da
IEP (calculated) 8.93
GRAVY (calculated) -0.39
Length 190 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSFTTTNTP PPYLLRKIYH RRVNQPFSVV CCTGEPQQDI FTRRRTLTSL ITFTVIGGAT SSALAQEKWG TRSFIKEKYF MPGLSPEDAA ARIKQTAEGL
101: RDMREMLDHM SWRYVIFYIR LKQAYLSQDL TNAMNILPES RRNDYVQAAN ELVENMSELD FYVRTPKVYE SYLYYEKTLK SIDNVVEFLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)