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AT1G14000.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : VH1-interacting kinase
Curator
Summary (TAIR10)
Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.
Computational
Description (TAIR10)
VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G14000-MONOMEReggNOG:COG0515eggNOG:KOG0192EMBL:AC007576EMBL:BT026491EMBL:CP002684EnsemblPlants:AT1G14000
EnsemblPlants:AT1G14000.1entrez:837960Gene3D:1.25.40.20GeneID:837960GO:GO:0004712GO:GO:0005524GO:GO:0009734
GO:GO:0009742GO:GO:0010305Gramene:AT1G14000.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF366InterPro:IPR000719InterPro:IPR001245
InterPro:IPR002110InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441InterPro:IPR020683KEGG:ath:AT1G14000OMA:LCWSGDI
Pfam:PF07714Pfam:PF12796Pfscan:PS50011Pfscan:PS50088Pfscan:PS50297PIR:C86273PRINTS:PR00109
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS50088PROSITE:PS50297Proteomes:UP000006548Reactome:R-ATH-450302
Reactome:R-ATH-450321RefSeq:NP_172853.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00248STRING:3702.AT1G14000.1
SUPFAM:SSF48403SUPFAM:SSF56112TAIR:AT1G14000tair10-symbols:VIKUniGene:At.11347UniGene:At.48185UniProt:Q9XI87
Coordinates (TAIR10) chr1:+:4797606..4800043
Molecular Weight (calculated) 49338.10 Da
IEP (calculated) 8.08
GRAVY (calculated) -0.48
Length 438 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)