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AT1G13750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21109274 (2011): extracellular region
  • PMID:16356755 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Purple acid phosphatases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1198-MONOMEReggNOG:COG1409eggNOG:KOG1378EMBL:AC027656EMBL:AY099570EMBL:AY818190EMBL:BT001252
EMBL:CP002684EnsemblPlants:AT1G13750EnsemblPlants:AT1G13750.1entrez:837935Gene3D:2.60.40.380Gene3D:3.60.21.10GeneID:837935
Genevisible:Q9LMX4GO:GO:0003993GO:GO:0005576GO:GO:0046872Gramene:AT1G13750.1hmmpanther:PTHR22953hmmpanther:PTHR22953:SF20
HOGENOM:HOG000239855InParanoid:Q9LMX4IntAct:Q9LMX4InterPro:IPR004843InterPro:IPR008963InterPro:IPR015914InterPro:IPR025733
InterPro:IPR029052KEGG:ath:AT1G13750OMA:GYSSCAYPaxDb:Q9LMX4Pfam:PF00149Pfam:PF14008Pfam:PF16656
Pfam:Q9LMX4PhylomeDB:Q9LMX4PRIDE:Q9LMX4PRO:PR:Q9LMX4ProteinModelPortal:Q9LMX4Proteomes:UP000006548RefSeq:NP_172830.1
SMR:Q9LMX4STRING:3702.AT1G13750.1SUPFAM:SSF49363SUPFAM:SSF56300TAIR:AT1G13750UniGene:At.48184UniGene:At.71063
UniProt:Q9LMX4
Coordinates (TAIR10) chr1:-:4715490..4718091
Molecular Weight (calculated) 68245.30 Da
IEP (calculated) 6.75
GRAVY (calculated) -0.32
Length 613 amino acids
Sequence (TAIR10)
(BLAST)
001: MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV
101: QPPRLCSAPV KFQYANFSNP RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE WDEMTVTWTS GYGLNLAEPV
201: VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE
301: VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV
401: PAQNRAKVWY SSDYGMFRFC VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG RESLQKLWQK YKVDIAIYGH
501: AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA
601: CAVDSCPATT LAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)