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AT1G13690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.989
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ATPase E1
Curator
Summary (TAIR10)
AtE1 - stimulates the ATPase activity of DnaK/DnaJ
Computational
Description (TAIR10)
ATPase E1 (ATE1); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 14554 Blast hits to 12500 proteins in 724 species: Archae - 8; Bacteria - 1323; Metazoa - 7103; Fungi - 1824; Plants - 2936; Viruses - 0; Other Eukaryotes - 1360 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2690-MONOMEReggNOG:COG0652eggNOG:KOG0111EMBL:AK228412EMBL:CP002684EnsemblPlants:AT1G13690EnsemblPlants:AT1G13690.1
entrez:837930Gene3D:3.30.70.330GeneID:837930GO:GO:0000166GO:GO:0003676GO:GO:0003755GO:GO:0006457
Gramene:AT1G13690.1hmmpanther:PTHR11071hmmpanther:PTHR11071:SF274HOGENOM:HOG000276232InterPro:IPR000504InterPro:IPR012677InterPro:IPR024936
KEGG:ath:AT1G13690ncoils:CoilOMA:HRKKMAEPANTHER:PTHR11071Pfam:PF00076Pfscan:PS50102PhylomeDB:Q0WRA3
PROSITE:PS50102Proteomes:UP000006548RefSeq:NP_563931.2SMART:SM00360SMR:Q0WRA3STRING:3702.AT1G13690.1SUPFAM:SSF54928
TAIR:AT1G13690tair10-symbols:ATE1UniGene:At.66943UniProt:Q0WRA3
Coordinates (TAIR10) chr1:+:4693380..4694179
Molecular Weight (calculated) 19810.10 Da
IEP (calculated) 4.40
GRAVY (calculated) -0.74
Length 177 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAVQQQQAM QKNTLYVGGL ADEVNESILH AAFIPFGDIK DVKTPLDQAN QKHRSFGFVT FLEREDASAA MDNMDGAELY GRVLTVNYAL PEKIKGGEQG
101: WAAHPLWADA DTWFERQQQE KEILKMQAEN KAAMETAEEL HRKKLAEDRQ GEMEEDTDTK NDPMARAEAD ALSHGDA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)