AT1G13580.1::SUBA5

AT1G13580.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?

Predictors

External Curations

AmiGO : endoplasmic reticulum 18643979
SwissProt : endoplasmic reticulum 16381842
TAIR : endoplasmic reticulum 18643979

Experimental Localisations and PPI

FP	MS/MS	PPI
PMID:18643979 (2008): endoplasmic reticulum		PMID:24833385 (2014): AT1G73080.1:None: PMID:24833385 (2014): AT1G48270.1:None: PMID:24833385 (2014): AT5G55380.1:None: PMID:24833385 (2014): AT4G01410.1:None: PMID:24833385 (2014): AT4G28650.1:None: PMID:24833385 (2014): AT2G33170.1:None: PMID:24833385 (2014): AT4G31100.1:None: PMID:24833385 (2014): AT2G41820.1:None: PMID:24833385 (2014): AT3G25805.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT3G25540.1 endoplasmic reticulum [6.3] AT2G31710.1 plasma membrane [5.93] AT1G76340.1 golgi [5.91] AT3G11320.1 endoplasmic reticulum [5.69] AT3G17430.1 golgi [5.52] AT1G67060.1 plasma membrane [5.46] AT5G11640.1 endoplasmic reticulum [5.34] AT1G30890.1 endoplasmic reticulum [5.16] AT3G02460.1 cytosol [5.1] AT1G06470.1 golgi [5.1]	AT1G48270.1 plasma membrane AT1G73080.1 plasma membrane AT2G33170.1 plasma membrane AT2G41820.1 plasma membrane AT4G01410.1 plasma membrane AT4G28650.1 plasma membrane AT4G31100.1 plasma membrane AT5G55380.1 plasma membrane AT3G25805.1 plastid

Description (TAIR10)

protein_coding : LAG1 longevity assurance homolog 3

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

LAG1 longevity assurance homolog 3 (LAG13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1); Has 1229 Blast hits to 1229 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 587; Fungi - 304; Plants - 168; Viruses - 3; Other Eukaryotes - 167 (source: NCBI BLink).

Protein Annotations

EnsemblPlants:AT1G13580	EnsemblPlants:AT1G13580.1	entrez:837919	hmmpanther:PTHR12560
hmmpanther:PTHR12560:SF13	Pfam:PF03798	Pfscan:PS50922	tair10-symbols:LAG13
TMHMM:TMhelix

Coordinates (TAIR10)

chr1:-:4645380..4646765

Molecular Weight (calculated)

28198.50 Da

IEP (calculated)

9.59

GRAVY (calculated)

0.22

Length

239 amino acids

Sequence (TAIR10)
(BLAST)

001: MGLLESVKSI NWEHESSPVY QDFRVLPLFA VFFPSIRFLL DRFVFEKLAK YLIYGKHRQD MGDDTTERKK KIRKFKESAW KCVYYLSAEI LALSVTYNEP
101: WFMNTKYFWV GPGDQTWPDQ QTKLKLKLLY MFVAGFYTYS IFALVFWETR RSDFGVSMGH HIATLILIVL SYVCSFSRVG SVVLALHDAS DVFLEVGKMS
201: KYSGAERIAS FSFILFVLSW IILRLIYYPF WILWSTRFV