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AT1G13560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.794
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22430844 (2012): Golgi
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21296373 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : aminoalcoholphosphotransferase 1
Curator
Summary (TAIR10)
Encodes aminoalcoholphosphotransferase AAPT1.
Computational
Description (TAIR10)
aminoalcoholphosphotransferase 1 (AAPT1); FUNCTIONS IN: phosphatidyltransferase activity, phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Choline/ethanolaminephosphotransferase (InterPro:IPR014472), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: aminoalcoholphosphotransferase (TAIR:AT3G25585.4); Has 927 Blast hits to 921 proteins in 239 species: Archae - 6; Bacteria - 34; Metazoa - 364; Fungi - 227; Plants - 82; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G13560-MONOMERBioGrid:23157BRENDA:2.7.8.1BRENDA:2.7.8.2
EC:2.7.8.1EC:2.7.8.2eggNOG:COG5050eggNOG:KOG2877
EMBL:AC027134EMBL:AF091843EMBL:AY080725EMBL:AY114062
EMBL:CP002684EnsemblPlants:AT1G13560EnsemblPlants:AT1G13560.1entrez:837917
ExpressionAtlas:O82567GeneID:837917Genevisible:O82567GO:GO:0004142
GO:GO:0004307GO:GO:0005794GO:GO:0006646GO:GO:0016021
GO:GO:0046872gramene_pathway:2.7.8.1gramene_pathway:2.7.8.2gramene_pathway:PWY-3561
gramene_pathway:PWY3O-450gramene_pathway:PWY4FS-2gramene_pathway:PWY4FS-6hmmpanther:PTHR10414
hmmpanther:PTHR10414:SF46HOGENOM:HOG000157893InParanoid:O82567IntAct:O82567
InterPro:IPR000462InterPro:IPR014472KEGG:ath:AT1G13560KO:K00993
OMA:FCFWVIAPANTHER:PTHR10414PaxDb:O82567Pfam:O82567
Pfam:PF01066PhylomeDB:O82567PIR:F86268PIRSF:PIRSF015665
PRIDE:O82567PRO:PR:O82567PROSITE:PS00379ProteinModelPortal:O82567
Proteomes:UP000006548Reactome:R-ATH-1483191Reactome:R-ATH-1483213RefSeq:NP_172813.1
scanprosite:PS00379STRING:3702.AT1G13560.1TAIR:AT1G13560tair10-symbols:AAPT1
tair10-symbols:ATAAPT1TMHMM:TMhelixUniGene:At.14784UniPathway:UPA00558
UniPathway:UPA00753UniProt:O82567
Coordinates (TAIR10) chr1:-:4638834..4641691
Molecular Weight (calculated) 43544.70 Da
IEP (calculated) 7.59
GRAVY (calculated) 0.61
Length 389 amino acids
Sequence (TAIR10)
(BLAST)
001: MGYIGAHGVA ALHRYKYSGV DHSYLAKYVL QPFWTRFVKV FPLWMPPNMI TLMGFMFLVT SSLLGYIYSP QLDSPPPRWV HFAHGLLLFL YQTFDAVDGK
101: QARRTNSSSP LGELFDHGCD ALACAFEAMA FGSTAMCGRD TFWFWVISAI PFYGATWEHY FTNTLILPVI NGPTEGLALI FVSHFFTAIV GAEWWAQQLG
201: QSIPLFSWVP FVNEIQTSRA VLYMMIAFAV IPTVAFNVTN VYKVVRSRNG SMVLALAMLY PFVVLLGGVL IWDYLSPINL IATYPHLVVL GTGLAFGFLV
301: GRMILAHLCD EPKGLKTNMC MSLLYLPFAL ANALTARLNA GVPLVDELWV LLGYCIFTVS LYLHFATSVI HEITEALGIY CFRITRKEA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)