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AT1G13210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:20843791 (2010): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : autoinhibited Ca2+/ATPase II
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
autoinhibited Ca2+/ATPase II (ACA.l); FUNCTIONS IN: calmodulin binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G25610.1); Has 13380 Blast hits to 11644 proteins in 1631 species: Archae - 144; Bacteria - 4268; Metazoa - 3224; Fungi - 2114; Plants - 1115; Viruses - 0; Other Eukaryotes - 2515 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G13210-MONOMEREC:3.6.3.1eggNOG:ENOG410ITKDeggNOG:ENOG410XPYKEMBL:AC007357EMBL:AY099862EMBL:CP002684
EnsemblPlants:AT1G13210EnsemblPlants:AT1G13210.1entrez:837881Gene3D:2.70.150.10Gene3D:3.40.1110.10Gene3D:3.40.50.1000GeneID:837881
Genevisible:Q9SAF5GO:GO:0000139GO:GO:0000287GO:GO:0004012GO:GO:0005524GO:GO:0005802GO:GO:0005886
GO:GO:0016021GO:GO:0045332GO:GO:0048194Gramene:AT1G13210.1hmmpanther:PTHR24092hmmpanther:PTHR24092:SF41HOGENOM:HOG000202528
InParanoid:Q9SAF5InterPro:IPR001757InterPro:IPR006539InterPro:IPR008250InterPro:IPR018303InterPro:IPR023214InterPro:IPR023299
InterPro:IPR032630InterPro:IPR032631KEGG:ath:AT1G13210KO:K01530OMA:APNDEEMPANTHER:PTHR24092PaxDb:Q9SAF5
Pfam:PF12710Pfam:PF16209Pfam:PF16212Pfam:Q9SAF5PhylomeDB:Q9SAF5PIR:F86266PRIDE:Q9SAF5
PRO:PR:Q9SAF5PROSITE:PS00154ProteinModelPortal:Q9SAF5Proteomes:UP000006548Reactome:R-ATH-936837RefSeq:NP_172780.1scanprosite:PS00154
STRING:3702.AT1G13210.1SUPFAM:0049471SUPFAM:0049473SUPFAM:SSF56784SUPFAM:SSF81660TAIR:AT1G13210tair10-symbols:ACA.l
TIGRfam:TIGR01494TIGRfam:TIGR01652TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652TMHMM:TMhelixUniGene:At.27871UniProt:Q9SAF5
Coordinates (TAIR10) chr1:-:4509252..4513774
Molecular Weight (calculated) 136591.00 Da
IEP (calculated) 6.96
GRAVY (calculated) -0.08
Length 1203 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTKCRRRRLH LSNIYAFKGR KSNFQEDHSH IGGPGFSRVV YCNEPNSPAA ERRNYVGNYV RSTKYTLASF IPKSLFEQFR RVANFYFLVT GVLSLTALSP
0101: YSPISALLPL TFVIAASMVK EAIEDWGRKK QDIEMNNRKV KVHDGNGIFR REGWRDLKVG NIVRVEKDEF FPADLLLLSS SYEDSICYVE TMNLDGETNL
0201: KVKQGLEATS SALHEDSDFK ELKAVVKCED PNADLYTFVG TLHFEEQRLP LSITQLLLRD SKLRNTEYIY GVVVFTGHDT KVIQNSTDPP SKRSRIERKM
0301: DKIIYLMFGV VFLMSFIGSI VFGIETREDR VRNGGRTERW YLRPDNADIF FDPDRAPMAA VYHFFTAVML YSYFIPISLY VSIEIVKVLQ SLFINNDILM
0401: YYEENDKPAH ARTSNLNEEL GMVDTILSDK TGTLTCNSME FIKCSIAGTA YGRGITEVER SMAMRSNGSS LVGDDLDVVV DQSGPKIKGF NFLDERVMKG
0501: NWVKQRDAAV LQKFFRLLAV CHTAIPETDE ATGSVSYEAE SPDEAAFVVA AREFGFEFFS RTQNGISFRE LDLASGKTVE RVYRLLNVLE FNSARKRMSV
0601: IVRDEDGRLL LLSKGADNVM FERLAKNGRK FEEKTREHVN EYADAGLRTL ILAYREVDEN EYIEFSKNFN EAKNSVTADR ESLIDEITEQ MERDLILLGA
0701: TAVEDKLQNG VPDCIDKLAQ AGIKIWVLTG DKMETAINIG FACSLLRQEM KQIIINLETP HIKALEKAGE KDAIEHASRE SVVNQMEEGK ALLTASSSAS
0801: SHEAFALIID GKSLTYALED DFKKKFLDLA TGCASVICCR SSPKQKALVT RLVKSGTGKT TLAIGDGAND VGMLQEADIG VGISGVEGMQ AVMSSDIAIA
0901: QFRYLERLLL VHGHWCYSRI SSMICYFFYK NITFGVTVFL YEAYTSFSAQ PAYNDWFLSL FNVFFSSLPV IALGVFDQDV SARYCYKFPL LYQEGVQNLL
1001: FSWKRIIGWM FNGVFTALAI FFLCKESLKH QLYNPNGKTA GREILGGTMY TCVVWVVNLQ MALAISYFTW LQHIVIWGSV AFWYIFLMIY GAITPSFSTD
1101: AYKVFIEALA PAPSYWLTTL FVMFFALIPF FVFKSVQMRF FPGYHQMIQW IRYEGHSNDP EFVEMVRQRS IRPTTVGFTA RRAASVRRSG RFHDQLNKNF
1201: IAF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)