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AT1G12845.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 8 Blast hits to 8 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JHPAeggNOG:ENOG4111B6QEMBL:BT028899EMBL:CP002684EnsemblPlants:AT1G12845EnsemblPlants:AT1G12845.1entrez:837841
GeneID:837841GO:GO:0016021Gramene:AT1G12845.1HOGENOM:HOG000119220KEGG:ath:AT1G12845OMA:CFNEPILPhylomeDB:Q0IGM1
Proteomes:UP000006548RefSeq:NP_563917.1STRING:3702.AT1G12845.1TAIR:AT1G12845TMHMM:TMhelixUniGene:At.49444UniProt:Q0IGM1
Coordinates (TAIR10) chr1:-:4379023..4379382
Molecular Weight (calculated) 12822.60 Da
IEP (calculated) 4.88
GRAVY (calculated) 0.55
Length 119 amino acids
Sequence (TAIR10)
(BLAST)
001: MALFSSVSVS AFLLIVVSVQ WTLVCSESTI LASPAVLPYI NAPDMSSFFP SPTKDWPIET ATSPVPEPEA PGPSSGQLNG KISGRSMRLH PDISLVLAIV
101: GICTFLCFNE PILVRFLHY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)