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AT1G12680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.892
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : phosphoenolpyruvate carboxylase-related kinase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G12680-MONOMEREC:2.7.11.-eggNOG:ENOG410XRMJeggNOG:KOG0032EMBL:AC025417EMBL:AY062754EMBL:BT006608
EMBL:CP002684EnsemblPlants:AT1G12680EnsemblPlants:AT1G12680.1entrez:837824GeneID:837824Genevisible:Q8W490GO:GO:0004683
GO:GO:0005516GO:GO:0005524GO:GO:0005737GO:GO:0005886GO:GO:0009738GO:GO:0009931GO:GO:0018105
GO:GO:0035556GO:GO:0046777Gramene:AT1G12680.1hmmpanther:PTHR24349hmmpanther:PTHR24349:SF102HOGENOM:HOG000233016InParanoid:Q8W490
IntAct:Q8W490InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:Q8W490KEGG:ath:AT1G12680
OMA:PIEQQCSPaxDb:Q8W490Pfam:PF00069Pfam:Q8W490Pfscan:PS50011PhylomeDB:Q8W490PIR:D86260
PRIDE:Q8W490PRO:PR:Q8W490PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q8W490Proteomes:UP000006548
Reactome:R-ATH-2142691Reactome:R-ATH-3371453Reactome:R-ATH-450385Reactome:R-ATH-5687128RefSeq:NP_172728.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q8W490STRING:3702.AT1G12680.1SUPFAM:SSF56112TAIR:AT1G12680tair10-symbols:PEPKR2UniGene:At.27242
UniProt:Q8W490
Coordinates (TAIR10) chr1:-:4320123..4322269
Molecular Weight (calculated) 52062.20 Da
IEP (calculated) 8.91
GRAVY (calculated) -0.42
Length 470 amino acids
Sequence (TAIR10)
(BLAST)
001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)