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AT1G12360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.967
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Sec1/munc18-like (SM) proteins superfamily
Curator
Summary (TAIR10)
encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis.
Computational
Description (TAIR10)
keule (KEU); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, cytokinesis; LOCATED IN: cytosol, peripheral to membrane of membrane fraction, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT4G12120.1); Has 1791 Blast hits to 1770 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 744; Fungi - 510; Plants - 223; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink).
Protein Annotations
BioGrid:23031eggNOG:COG5158eggNOG:KOG1300EMBL:AC025416EMBL:AF331066EMBL:AK227584EMBL:CP002684
EnsemblPlants:AT1G12360EnsemblPlants:AT1G12360.1entrez:837791Gene3D:3.40.50.1910GeneID:837791Genevisible:Q9C5X3GO:GO:0005773
GO:GO:0005829GO:GO:0005856GO:GO:0005886GO:GO:0006904GO:GO:0007049GO:GO:0009524GO:GO:0015031
GO:GO:0019898GO:GO:0051301Gramene:AT1G12360.1hmmpanther:PTHR11679hmmpanther:PTHR11679:SF38HOGENOM:HOG000265497InParanoid:Q9C5X3
IntAct:Q9C5X3InterPro:IPR001619InterPro:IPR027482iPTMnet:Q9C5X3KEGG:ath:AT1G12360KO:K15292OMA:HKKKHGL
PANTHER:PTHR11679PaxDb:Q9C5X3Pfam:PF00995Pfam:Q9C5X3PhylomeDB:Q9C5X3PIR:C86258PIRSF:PIRSF005715
PRIDE:Q9C5X3PRO:PR:Q9C5X3ProteinModelPortal:Q9C5X3Proteomes:UP000006548RefSeq:NP_563905.1SMR:Q9C5X3STRING:3702.AT1G12360.1
SUPFAM:SSF56815TAIR:AT1G12360tair10-symbols:KEUUniGene:At.70097UniProt:Q9C5X3
Coordinates (TAIR10) chr1:+:4201172..4206144
Molecular Weight (calculated) 75087.20 Da
IEP (calculated) 8.08
GRAVY (calculated) -0.44
Length 666 amino acids
Sequence (TAIR10)
(BLAST)
001: MSYSDSDSSS HGGEYKNFRQ ITRERLLYEM LRSAKTGSSK STWKVLIMDK LTVKIMSYAC KMADITQEGV SLVEDIFRRR QPLPSMDAIY FIQPTKENVI
101: MFLSDMSGKS PLYKKAFVFF SSPVSKELVG HIKKDSSVLP RIGALREMNL EFFAIDSQGF ITDHERALED LFGDEETSRK GDACLNVMAS RIATVFASLR
201: EFPAVRYRAA KSLDASTMTT LRDLIPTKLA AGIWNCLAKH KQSIENFPQT ETCELLILDR SIDQIAPVIH EWTYDAMCHD LLNMEGNKYV HVIPSKSGGQ
301: PEKKDVLLEE HDPIWLELRH AHIADASERL HDKMTNFLSK NKAAQLQGKR DGAELSTRDL QKMVQALPQY SEQIDKLSLH VEIARKLNDL IREQGLRELG
401: QLEQDLVFGD AGMKDVIKYL STQEEASREG KLRLLMILAT IYPEKFEGEK GQNLMKLAKL SSDDMTAVNN MSLLGSAVDA KKNTPGGFTL KFDLHKKKRA
501: VRKERQEEAA WQLSRFYPMI EELIEKLSKG ELPKEDFPCM NDPSPSFHGS TSLSSAASSS QGQAAQSMRS RRTPTWAKPR GSDDGYSSDS VLRHASSDFR
601: KMGQRIFVFI VGGATRSELK VCHKLSTKLK REVILGSTSL DDPPQFITKL KLLTANDDLS LDDLQI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)