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AT1G12160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.633
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Flavin-binding monooxygenase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G12130.1); Has 8661 Blast hits to 8102 proteins in 1035 species: Archae - 4; Bacteria - 3767; Metazoa - 1139; Fungi - 1126; Plants - 753; Viruses - 0; Other Eukaryotes - 1872 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G12160-MONOMERBioGrid:23008EC:1.8.-.-eggNOG:COG2072
eggNOG:KOG1399EMBL:AC022522EMBL:BT030389EMBL:CP002684
EnsemblPlants:AT1G12160EnsemblPlants:AT1G12160.1entrez:837768Gene3D:3.50.50.60
GeneID:837768Genevisible:Q9FWW6GO:GO:0004499GO:GO:0050660
GO:GO:0050661Gramene:AT1G12160.1hmmpanther:PTHR23023hmmpanther:PTHR23023:SF94
HOGENOM:HOG000237857InParanoid:Q9FWW6IntAct:Q9FWW6InterPro:IPR000960
InterPro:IPR020946InterPro:IPR023753KEGG:ath:AT1G12160OMA:IYRARED
PaxDb:Q9FWW6Pfam:PF00743Pfam:Q9FWW6PhylomeDB:Q9FWW6
PIR:F86256PRIDE:Q9FWW6PRINTS:PR00370PRO:PR:Q9FWW6
ProteinModelPortal:Q9FWW6Proteomes:UP000006548Reactome:R-ATH-217271RefSeq:NP_172680.1
SMR:Q9FWW6STRING:3702.AT1G12160.1SUPFAM:SSF51905TAIR:AT1G12160
UniGene:At.16223UniProt:Q9FWW6
Coordinates (TAIR10) chr1:+:4126068..4128090
Molecular Weight (calculated) 53274.30 Da
IEP (calculated) 6.68
GRAVY (calculated) -0.32
Length 468 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSVITSRAR HVAVIGLGAA GLVAVRELRR EGHTVIGFER EKHVGGLWVY TDRVDSDSVS VDPDRTIVHS SIYQSLRTNL PRECMGYSDF PFVTRSSDGD
101: PRRYPDHREV LMYLQDFAKE FKIEDMIRFE TEVLCVEPSP ENNRKWRVQF KSSNGVSGEE IFDAVVVCNG HFTEPRLAHI PGIESWPGKQ IHSHNYRIPD
201: PFKDEVVIVI GSQASGNDIS TDIATIAKEV HISSKMVASD SYGCYDNLRI HPTIYRARED GSVVFRNGKV VFADAIVHCT GYKYHFPFLK TSGYVTVEDN
301: RVGPLYKHVF PPALAPGISF IGLPFMGLQF FMFEIQSKWV ASVLSGRVKL PAEDKMMEEA VAFYSKLEDL GIPKRYTHFL TDPRGNPMLG TFKPEDAVVI
401: SQSDYFNWIA KQCGCTSIER WRERLYNVAI KKVFFGGDSY RDRWDDDQLI EEVYREFAKL KPNQDCSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)