AT1G11915.1::SUBA5

AT1G11915.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
extracellular 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
		PMID:24833385 (2014): AT4G12250.1:None: PMID:24833385 (2014): AT2G41705.1:None: PMID:24833385 (2014): AT1G17280.1:None: PMID:24833385 (2014): AT3G17000.1:None: PMID:24833385 (2014): AT4G37680.1:None: PMID:24833385 (2014): AT4G30850.1:None: PMID:24833385 (2014): AT5G52240.1:None: PMID:24833385 (2014): AT4G37370.1:None: PMID:24833385 (2014): AT3G55990.1:None: PMID:24833385 (2014): AT5G06320.1:None: PMID:24833385 (2014): AT1G31812.1:None: PMID:24833385 (2014): AT1G47640.1:None: PMID:24833385 (2014): AT1G07860.1:None: PMID:24833385 (2014): AT1G14990.1:None: PMID:24833385 (2014): AT1G63110.1:None: PMID:24833385 (2014): AT3G28220.1:None: PMID:24833385 (2014): AT4G25360.1:None: PMID:24833385 (2014): AT1G29060.1:None: PMID:24833385 (2014): AT5G59650.1:None: PMID:24833385 (2014): AT4G20790.1:None: PMID:24833385 (2014): AT5G49540.1:None: PMID:24833385 (2014): AT4G30500.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT1G34640.1:None: PMID:24833385 (2014): AT3G26370.1:None: PMID:24833385 (2014): AT5G11890.1:None: PMID:24833385 (2014): AT2G26180.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

no coexpression data

AT1G31812.1 cytosol
AT4G37370.1 endoplasmic reticulum
AT4G25360.1 endoplasmic reticulum
AT3G17000.1 endoplasmic reticulum
AT5G52240.1 endoplasmic reticulum
AT1G47640.1 endoplasmic reticulum
AT1G07860.1 endoplasmic reticulum
AT1G34640.1 extracellular
AT1G29060.1 golgi
AT4G37680.1 golgi
AT1G17280.1 golgi
AT3G26370.1 golgi
AT4G30850.1 golgi
AT3G55990.1 golgi
AT3G66654.1 golgi
AT4G12250.1 golgi
AT4G30500.1 endoplasmic reticulum, golgi
AT1G14990.1 mitochondrion
AT2G26180.1 nucleus
AT4G20790.1 plasma membrane
AT2G41705.1 plasma membrane
AT5G06320.1 plasma membrane
AT5G11890.1 plasma membrane
AT5G59650.1 plasma membrane
AT3G28220.1 vacuole
AT5G49540.1 vacuole
AT1G63110.1 vacuole

Description (TAIR10)

protein_coding :

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IN33	eggNOG:ENOG410YBHD	EMBL:AC002131	EMBL:AF360349
EMBL:AY051085	EMBL:CP002684	EnsemblPlants:AT1G11915	EnsemblPlants:AT1G11915.1
entrez:837741	GeneID:837741	GO:GO:0016021	GO:GO:0030247
Gramene:AT1G11915.1	hmmpanther:PTHR33355	hmmpanther:PTHR33355:SF5	HOGENOM:HOG000082571
InterPro:IPR025287	KEGG:ath:AT1G11915	OMA:SAGYLCR	Pfam:PF13947
PhylomeDB:O65389	PIR:G86253	Proteomes:UP000006548	RefSeq:NP_563896.1
TAIR:AT1G11915	TMHMM:TMhelix	UniGene:At.10633	UniProt:O65389

Coordinates (TAIR10)

chr1:+:4021830..4023084

Molecular Weight (calculated)

36744.60 Da

IEP (calculated)

7.74

GRAVY (calculated)

-0.23

Length

329 amino acids

Sequence (TAIR10)
(BLAST)

001: MSPLHSYIIF FSLLMTILLQ SSTTSSQSNL CRSSCGNIPI NYPFSIDDGC GSPYYRHMLI CSDNDTKLEL RTPSGKYPVK SISYSDPHLL VSDPFMWNCQ
101: DRDNFRPTRS FSIDSSTHFT VSPQNDYLFF NCNTDKVIVE PKPLFCERFP DRCDSSCDSS SYLCRHLPEC GSALGSRVSC CSYYPKATQS LRLMLQDCAT
201: YTSVYWRSTG VENAPYDQFP EYGIRVDYEF PVTMKCLLCQ ETTKGGGVCG FNTRTRDFLC LCKQGNVTTY CKDPSLVNHK RVGAIAGTVT AVSAAGAIGV
301: AGGVYWYLRK VRANAPVTCG VQSNENRIF