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AT1G11840.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glyoxalase I homolog
Curator
Summary (TAIR10)
Encodes a glyoxalase I homolog ATGLX1.
Computational
Description (TAIR10)
glyoxalase I homolog (GLX1); FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: peroxisome, plasma membrane, vacuole, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 8678 Blast hits to 5178 proteins in 1682 species: Archae - 141; Bacteria - 5669; Metazoa - 503; Fungi - 263; Plants - 249; Viruses - 0; Other Eukaryotes - 1853 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G11840-MONOMERBioCyc:ARA:GQT-1172-MONOMERBioCyc:ARA:GQT-1173-MONOMERBioCyc:ARA:GQT-1174-MONOMERBioCyc:ARA:GQT-1175-MONOMEREC:4.4.1.5eggNOG:COG0346
eggNOG:KOG2943EMBL:AB050553EMBL:AC002131EMBL:AF428272EMBL:AK318730EMBL:AY074569EMBL:AY087874
EMBL:AY097360EMBL:CP002684EnsemblPlants:AT1G11840EnsemblPlants:AT1G11840.1EnsemblPlants:AT1G11840.2EnsemblPlants:AT1G11840.3EnsemblPlants:AT1G11840.4
entrez:837731ExpressionAtlas:O65398Gene3D:3.10.180.10GeneID:837731GO:GO:0004462GO:GO:0046872Gramene:AT1G11840.1
Gramene:AT1G11840.2Gramene:AT1G11840.3Gramene:AT1G11840.4gramene_pathway:4.4.1.5gramene_pathway:PWY-5386hmmpanther:PTHR10374hmmpanther:PTHR10374:SF17
InterPro:IPR004360InterPro:IPR004361InterPro:IPR018146InterPro:IPR029068KEGG:00620+4.4.1.5KEGG:ath:AT1G11840KO:K01759
Pfam:PF00903PhylomeDB:O65398PIR:F86252ProMEX:O65398PROSITE:PS00934PROSITE:PS00935Proteomes:UP000006548
RefSeq:NP_001031025.1RefSeq:NP_172648.1RefSeq:NP_849643.1RefSeq:NP_849644.2scanprosite:PS00934scanprosite:PS00935SMR:O65398
STRING:3702.AT1G11840.6SUPFAM:SSF54593SwissPalm:O65398TAIR:AT1G11840tair10-symbols:ATGLX1tair10-symbols:GLX1TIGRfam:TIGR00068
TIGRFAMs:TIGR00068UniGene:At.23220UniPathway:UPA00619UniProt:O65398
Coordinates (TAIR10) chr1:+:3996045..3997518
Molecular Weight (calculated) 31930.20 Da
IEP (calculated) 4.91
GRAVY (calculated) -0.34
Length 283 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEASDLLEW PKKDNRRFLH VVYRVGDLDR TIEFYTEVFG MKLLRKRDIP EEKYSNAFLG FGPETSNFVV ELTYNYGVSS YDIGTGFGHF AISTQDVSKL
101: VENVRAKGGN VTREPGPVKG GGSVIAFVKD PDGYTFELIQ RGPTPEPFCQ VMLRVGDLDR AIKFYEKALG MRLLRKIERP EYKYTIGMMG YAEEYESIVL
201: ELTYNYDVTE YTKGNAYAQI AIGTDDVYKS GEVIKIVNQE LGGKITREAG PLPGLGTKIV SFLDPDGWKT VLVDNKDFLK ELE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)