AT1G11660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : heat shock protein 70 (Hsp 70) family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 25020 Blast hits to 24886 proteins in 4391 species: Archae - 151; Bacteria - 11311; Metazoa - 3542; Fungi - 1480; Plants - 1013; Viruses - 97; Other Eukaryotes - 7426 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3921056..3924347 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85224.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.43 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 763 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPAMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QNDLRLFPFE TSEDSDGGIQ 101: IRLRYMGEIQ SFSPVQILGM LLSHLKQIAE KSLKTPVSDC VIGIPSYFTN SQRLAYLDAA AIAGLRPLRL MHDSTATALG YGIYKTDLVA NSSPTYIVFI 201: DIGHCDTQVC VASFESGSMR VRSHAFDRNL GGRDFDEVLF NHFALEFKEK YNIDVYTNTK ACVRLRASCE KVKKVLSANA EAQLNIECLM EEKDVRSFIK 301: REEFEQLSAG LLERLIVPCQ KALADSGLSL DQIHSVELVG SGSRIPAISK MLSSLFKREL GRTVNASECV ARGCALQCAM LSPVFRVRDY EVQDSYPFAI 401: GFSSDKGPIN TPSNELLFPK GQIFPSVKVL TLHRENTFQL EAFYANHNEL SPDIPTQISS FMIGPFHISH GEAARVKVRV QLNLHGIVTI DSATLIEYHK 501: ENITSEEMIS EENHQSSAMK DGSLDPSSGS IGNEPKAIKR MEIPVVANVS GALTKDELSE AKQRENSLVE QDLKMESTKD KKNALESFVY EMRDKMLNTY 601: RNTATESERE CIARNLQETE EWLYEDGDDE SENAYIEKLN DVKKLIDPIE NRFKDGEERV QASKDLLKTI ADNRMAAESL PPPRKNAVLD ECHKAERWLH 701: EKTTEQESLP KDANPELQSA EIRRKADALN ATCKYIGKSN SPPAKPEHNG SYGSRKSDDM ELD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)