AT1G11560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.671 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Oligosaccharyltransferase complex/magnesium transporter family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: oligosaccharide transmembrane transporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Magnesium transporter protein 1 (InterPro:IPR006844), Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT1G61790.1); Has 312 Blast hits to 312 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 44; Plants - 93; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3881788..3882819 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39164.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.41 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.17 | ||||||||||||||||||||||||||||||||
| Length | 343 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVIQTNLSYR FFILIVFLFT LANPKSDSDL KNELVSLRST AESGVISFNN DDVSKFITSV STPRPYSLII FFDAVHLHGN SQLRLPEFRR EFRLVSATFI 101: TNNNNESNGT KLFFCEIEST HSEASFRRFA VESLPHISLV SPTTENLTES DQMDGGDFTG LAESMAEFVE RQTKLTVCSI QRPPLISKTQ IGIIVAIIII 201: STPILIKKIL KGETLLHDHR IWLVGAVFVY FFSVSGTMHN IIREMPMYIK DYEDSSKFVF FIEESEMQLG AEGFFVGFLY TVVGLLLAFV TNVVVRVKKL 301: DEQRMAMLLA LSISFWAVRK VVYLDNWKTG YEIYPYWPSS WRG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)