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AT1G11545.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : xyloglucan endotransglucosylase/hydrolase 8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
xyloglucan endotransglucosylase/hydrolase 8 (XTH8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 2134 Blast hits to 2114 proteins in 302 species: Archae - 0; Bacteria - 267; Metazoa - 0; Fungi - 408; Plants - 1375; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G11545-MONOMERCAZy:GH16EC:2.4.1.207eggNOG:ENOG410INDTeggNOG:ENOG410YAVHEMBL:AC011661EMBL:AK228427
EMBL:AY088546EMBL:CP002684EnsemblPlants:AT1G11545EnsemblPlants:AT1G11545.1entrez:837698Gene3D:2.60.120.200GeneID:837698
Genevisible:Q8L9A9GO:GO:0004553GO:GO:0005618GO:GO:0010411GO:GO:0016762GO:GO:0042546GO:GO:0048046
GO:GO:0071555Gramene:AT1G11545.1hmmpanther:PTHR31062hmmpanther:PTHR31062:SF1HOGENOM:HOG000236368InParanoid:Q8L9A9InterPro:IPR000757
InterPro:IPR008263InterPro:IPR008264InterPro:IPR010713InterPro:IPR013320InterPro:IPR016455KEGG:ath:AT1G11545KO:K08235
OMA:ITSCSAMPaxDb:Q8L9A9Pfam:PF00722Pfam:PF06955Pfam:Q8L9A9Pfscan:PS51762PIR:G86248
PIRSF:PIRSF005604PRIDE:Q8L9A9PRINTS:PR00737PRO:PR:Q8L9A9PROSITE:PS01034PROSITE:PS51762ProteinModelPortal:Q8L9A9
Proteomes:UP000006548RefSeq:NP_563892.1scanprosite:PS01034SMR:Q8L9A9STRING:3702.AT1G11545.1SUPFAM:SSF49899TAIR:AT1G11545
tair10-symbols:XTH8TMHMM:TMhelixUniGene:At.47525UniProt:Q8L9A9
Coordinates (TAIR10) chr1:-:3878689..3880286
Molecular Weight (calculated) 35566.50 Da
IEP (calculated) 5.03
GRAVY (calculated) -0.54
Length 305 amino acids
Sequence (TAIR10)
(BLAST)
001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)