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AT1G11430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16207701 (2006): plastid
  • PMID:15028209 (2004): plastid
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : plastid developmental protein DAG, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
plastid developmental protein DAG, putative; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 252 Blast hits to 229 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 252; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IG9MeggNOG:ENOG410YD5ZEMBL:AC011661EMBL:AK117508
EMBL:AY087455EMBL:BT005071EMBL:CP002684EnsemblPlants:AT1G11430
EnsemblPlants:AT1G11430.1entrez:837685GeneID:837685Genevisible:Q9LPZ1
GO:GO:0009507GO:GO:0009570GO:GO:0009941GO:GO:1900865
Gramene:AT1G11430.1hmmpanther:PTHR31346hmmpanther:PTHR31346:SF3IntAct:Q9LPZ1
KEGG:ath:AT1G11430OMA:RNNTKYQPaxDb:Q9LPZ1Pfam:Q9LPZ1
PhylomeDB:Q9LPZ1PRIDE:Q9LPZ1PRO:PR:Q9LPZ1ProMEX:Q9LPZ1
Proteomes:UP000006548RefSeq:NP_172610.1STRING:3702.AT1G11430.1TAIR:AT1G11430
UniGene:At.42133UniProt:Q9LPZ1
Coordinates (TAIR10) chr1:+:3847273..3848938
Molecular Weight (calculated) 26201.90 Da
IEP (calculated) 9.19
GRAVY (calculated) -0.72
Length 232 amino acids
Sequence (TAIR10)
(BLAST)
001: MASFTTTSSS SLLLKTLLPV SHLNRFSTLS GIRVGDSWTP LLRNISTAGS RRRVAIVKAA TVDSDYSSKR SNSNEQRETI MLPGCDYNHW LIVMEFPKDP
101: APSRDQMIDT YLNTLATVLG SMEEAKKNMY AFSTTTYTGF QCTIDEETSE KFKGLPGVLW VLPDSYIDVK NKDYGGDKYI NGEIIPCTYP TYQPKQRNNT
201: KYQSKRYERK RDGPPPPEQR KPRQEPAASD SS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)