AT1G11390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3834762..3837305 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70596.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.31 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||
| Length | 624 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRVLISKIV GKQTQSLVSN QKDRVSQWGS YRTAFTAALR SPQLRTYSSS GRIPSNVYCT FAFRDLKGSF LSNHLSRSYT TAPARNVVSH HAQIAWRRLH 101: YKYSERISTI AQAFSLSLTR SHLLIPGIVA VTCGQVAWAQ RAPGSGINHY ASDKSLYTRA KNGPIFLSSL LFSVIEGFIL IGRAFYIACL FTPTILMGLV 201: VESCGPRFRK IWLEMVHRTL ERAGPAFIKW GQWAATRPDL FPKDLCSQLS KLHSNAPEHS FAYTKKTIEK AFGRKLSEIF EEFDEVPVAS GSIAQVHRAS 301: LRFQYPGQKS KSSLVAVKVR HPGVGESIRR DFVIINLVAK ISTLIPALKW LRLDESVQQF GVFMLSQVDL AREASHLSRF IYNFRRWKDV SFPKPVYPLV 401: HPAVLVETYE HGESVARYVD GMEGHEWIKT RLAHIGTHAL LKMLLVDNFI HADMHPGNIL VRKKASRGGL FKTKKPHIVF LDVGMTAELA KNDRENLLDF 501: FKAVARRDGR TAAERTLKLS RKQNCPNPEA FIEEVEEAFK FWGTPEGDLV HPADCMHELL EKVRRHRVNI DGNVCTVMVT TLVLEGWQRK LDPGYDVMHT 601: LQTMVLKTDW AKSLSYTVDG LMAP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)