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AT1G11390.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0661eggNOG:KOG1236EMBL:CP002684EnsemblPlants:AT1G11390EnsemblPlants:AT1G11390.1entrez:837681GeneID:837681
GO:GO:0016021GO:GO:0016301Gramene:AT1G11390.1hmmpanther:PTHR10566hmmpanther:PTHR10566:SF93InParanoid:F4I8V6InterPro:IPR004147
InterPro:IPR011009KEGG:ath:AT1G11390KO:K08869OMA:LMTIGSHPaxDb:F4I8V6Pfam:PF03109PRIDE:F4I8V6
ProteinModelPortal:F4I8V6Proteomes:UP000006548RefSeq:NP_172606.3SMR:F4I8V6STRING:3702.AT1G11390.1SUPFAM:SSF56112TAIR:AT1G11390
TMHMM:TMhelixUniGene:At.42136UniProt:F4I8V6
Coordinates (TAIR10) chr1:-:3834762..3837305
Molecular Weight (calculated) 70596.60 Da
IEP (calculated) 10.31
GRAVY (calculated) -0.15
Length 624 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRVLISKIV GKQTQSLVSN QKDRVSQWGS YRTAFTAALR SPQLRTYSSS GRIPSNVYCT FAFRDLKGSF LSNHLSRSYT TAPARNVVSH HAQIAWRRLH
101: YKYSERISTI AQAFSLSLTR SHLLIPGIVA VTCGQVAWAQ RAPGSGINHY ASDKSLYTRA KNGPIFLSSL LFSVIEGFIL IGRAFYIACL FTPTILMGLV
201: VESCGPRFRK IWLEMVHRTL ERAGPAFIKW GQWAATRPDL FPKDLCSQLS KLHSNAPEHS FAYTKKTIEK AFGRKLSEIF EEFDEVPVAS GSIAQVHRAS
301: LRFQYPGQKS KSSLVAVKVR HPGVGESIRR DFVIINLVAK ISTLIPALKW LRLDESVQQF GVFMLSQVDL AREASHLSRF IYNFRRWKDV SFPKPVYPLV
401: HPAVLVETYE HGESVARYVD GMEGHEWIKT RLAHIGTHAL LKMLLVDNFI HADMHPGNIL VRKKASRGGL FKTKKPHIVF LDVGMTAELA KNDRENLLDF
501: FKAVARRDGR TAAERTLKLS RKQNCPNPEA FIEEVEEAFK FWGTPEGDLV HPADCMHELL EKVRRHRVNI DGNVCTVMVT TLVLEGWQRK LDPGYDVMHT
601: LQTMVLKTDW AKSLSYTVDG LMAP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)