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AT1G11210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.506
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF761)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JU59eggNOG:ENOG4110775EMBL:AC007259EMBL:AF324987EMBL:AY049281EMBL:AY090289EMBL:CP002684
EnsemblPlants:AT1G11210EnsemblPlants:AT1G11210.1entrez:837662GeneID:837662GO:GO:0006979GO:GO:0016021Gramene:AT1G11210.1
hmmpanther:PTHR33098hmmpanther:PTHR33098:SF10InterPro:IPR025520KEGG:ath:AT1G11210OMA:KCNDERFPfam:PF14364PIR:A86246
Proteomes:UP000006548RefSeq:NP_563885.1STRING:3702.AT1G11210.1TAIR:AT1G11210TMHMM:TMhelixUniGene:At.11566UniProt:Q9SXA7
Coordinates (TAIR10) chr1:-:3755876..3756911
Molecular Weight (calculated) 34904.30 Da
IEP (calculated) 9.95
GRAVY (calculated) -0.45
Length 308 amino acids
Sequence (TAIR10)
(BLAST)
001: MASWMKAVLI STGVVATAMH LKVIVPVAMD FSQNPIILSS FLTWLKPPYL YVITNVIIIV VGVSYRITTV SSHVDGKDYE ASYSGDNKFQ TDHQQIVQEA
101: PLRRRTETKD ADFGFIGKVL QIVKEPEVVY EEKERPATVE EEEKKCIIVV SKSENQPPVE KPLVTARIGQ KKPVVKTTPA ERNSMRALRV AKPKRNETLE
201: NTWKMIMEGN KSTLPLTSYY KRPDTFGLGE ETKQSGVLKK SETFSDRTNC YQSLPPPPPP LVKVKKVKVS RSRDELNRKV EAFIKKCNDE RFASMKLDNE
301: VARHGLSY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)