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AT1G11120.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.715
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZ19eggNOG:ENOG410ZASQEMBL:CP002684EnsemblPlants:AT1G11120EnsemblPlants:AT1G11120.1entrez:837653ExpressionAtlas:F4I7D6
GeneID:837653GO:GO:0016021Gramene:AT1G11120.1hmmpanther:PTHR33728hmmpanther:PTHR33728:SF1InParanoid:F4I7D6OMA:CYPERIS
PaxDb:F4I7D6Proteomes:UP000006548RefSeq:NP_172579.2TAIR:AT1G11120TMHMM:TMhelixUniGene:At.42150UniGene:At.75250
UniProt:F4I7D6
Coordinates (TAIR10) chr1:+:3715229..3717320
Molecular Weight (calculated) 20606.60 Da
IEP (calculated) 8.26
GRAVY (calculated) -0.14
Length 187 amino acids
Sequence (TAIR10)
(BLAST)
001: MRDLEHLKTN LNHQWPPIGA PMNLRREEPW KSQFDDSVNA VSFGFVATAI LISMFLVMAI FERLIRTTTT STTNSDSSSS RVLPGMDSRV GFNGAATKLG
101: YQSPKASNNR IVFSFSFNIL KSELFIVIIL RMTVYSNGVS VLMPGDDIPT FIAHPAPVPC PPQNISQSQH QHGSSKDSSS SNSIQEC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)