AT1G11080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : serine carboxypeptidase-like 31 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
serine carboxypeptidase-like 31 (scpl31); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 30 (TAIR:AT4G15100.1); Has 3569 Blast hits to 3515 proteins in 359 species: Archae - 0; Bacteria - 168; Metazoa - 632; Fungi - 857; Plants - 1467; Viruses - 0; Other Eukaryotes - 445 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3694917..3697759 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55447.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.30 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 492 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNYQTKNIS NLLTSLCFTT LLILAPVVIC TRQHRFDSPK RSLLANEQDL VTGLPGQPDV SFRHYAGYVP VDESNGRAMF YWFFEAMDLP KEKPLVLWLN 101: GGPGCSSVGY GATQEIGPFL VDTNGNGLNF NPYAWNKEAN MLFLESPVGV GFSYSNTSSD YQKLGDDFTA RDAYTFLCNW FEKFPEHKEN TFYIAGESYA 201: GKYVPELAEV VYDNNNNNKK NGSSFHINLK GILLGNPETS DAEDWRGWVD YAWSHAVISD ETHRIITRTC NFSSDNTWSN DECNEAVAEV LKQYHEIDIY 301: SIYTSVCIGD SARSSYFDSA QFKTNSRISS KRMPPRLMGG YDPCLDDYAR VFYNRADVQK SLHASDGVNL KNWSICNMEI FNNWTGSNPS VLPIYEKLIA 401: GGLRIWVYSG DTDGRVPVLA TRYSLNALEL PIKTAWRPWY HEKQVSGWLQ EYEGLTFATF RGAGHAVPCF KPSSSLAFFS AFLSGVPPPP SR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)