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AT1G10690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JF8QeggNOG:ENOG4111AN6EMBL:AC007354EMBL:BT012351
EMBL:BT012362EMBL:CP002684EnsemblPlants:AT1G10690EnsemblPlants:AT1G10690.1
entrez:837612GeneID:837612Gramene:AT1G10690.1hmmpanther:PTHR33142
hmmpanther:PTHR33142:SF2HOGENOM:HOG000090819IntAct:Q9SAD3KEGG:ath:AT1G10690
OMA:IPRVPPCPhylomeDB:Q9SAD3PIR:C86240Proteomes:UP000006548
RefSeq:NP_172539.1STRING:3702.AT1G10690.1TAIR:AT1G10690UniGene:At.43217
UniProt:Q9SAD3
Coordinates (TAIR10) chr1:-:3550236..3550568
Molecular Weight (calculated) 12166.50 Da
IEP (calculated) 9.22
GRAVY (calculated) -0.61
Length 110 amino acids
Sequence (TAIR10)
(BLAST)
001: MGYSGKPHHQ LDGEIRESTD GKKWVIAGIP SRSPLKQINL SPGVTVTETE EQDQCPTTPT AVSVRIPRVP PCPAAPKKRK PSLKCSYVTV TRDYFSPPDL
101: ETVFIQRASY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)