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AT1G10660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.691
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 155 Blast hits to 154 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 139; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J70JeggNOG:ENOG41123NREMBL:AK317266EMBL:BT000960
EMBL:CP002684EnsemblPlants:AT1G10660EnsemblPlants:AT1G10660.1EnsemblPlants:AT1G10660.2
EnsemblPlants:AT1G10660.3EnsemblPlants:AT1G10660.4entrez:837609GeneID:837609
GO:GO:0016021Gramene:AT1G10660.1Gramene:AT1G10660.2Gramene:AT1G10660.3
Gramene:AT1G10660.4hmmpanther:PTHR12242hmmpanther:PTHR12242:SF10HOGENOM:HOG000242492
KEGG:ath:AT1G10660OMA:HIPCFAVPhylomeDB:Q8H101Proteomes:UP000006548
RefSeq:NP_172536.1RefSeq:NP_973803.1RefSeq:NP_973804.1RefSeq:NP_973805.1
STRING:3702.AT1G10660.1TAIR:AT1G10660TMHMM:TMhelixUniGene:At.22404
UniProt:Q8H101
Coordinates (TAIR10) chr1:+:3533009..3534781
Molecular Weight (calculated) 36763.90 Da
IEP (calculated) 8.95
GRAVY (calculated) 0.39
Length 320 amino acids
Sequence (TAIR10)
(BLAST)
001: MAADTTASSY WLNWRVLLCA LILLAPIVLA AVLIWKYEGK RRRQRESQRE LPGTLFQDEA WTTCFKRIHP LWLLAFRVFS FVAMLTLLIS NVVRDGAGIF
101: YFYTQWTFTL VTLYFGYASV LSVYGCCIYN KEASGNMESY TSIGDTEQGT YRPPIALDGE GNTSKASNRP SEAPARKTAG FWVYIFQILF QTCAGAVVLT
201: DIVFWAIIYP FTKGYKLSFL DVCMHSLNAV FLLGDTSLNS LRFPLFRIAY FVLWSCIFVA YQWIIHAVKN LWWPYQFLDL SSPYAPLWYL GVAVMHIPCF
301: AVFALVIKLK NYLLQQRHNS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)