AT1G10620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.979 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G23540.1); Has 259832 Blast hits to 189065 proteins in 5658 species: Archae - 530; Bacteria - 41689; Metazoa - 96109; Fungi - 30957; Plants - 48835; Viruses - 4506; Other Eukaryotes - 37206 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3509001..3511975 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77553.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.47 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.58 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 718 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDKVQQQADL FGKTISPFVA SQPTNVGGFT DQKIIGGSET TQPPATSPPS PPSPDTQTSP PPATAAQPPP NQPPNTTPPP TPPSSPPPSI TPPPSPPQPQ 101: PPPQSTPTGD SPVVIPFPKP QLPPPSLFPP PSLVNQLPDP RPNDNNILEP INNPISLPSP PSTPFSPPSQ ENSGSQGSPP LSSLLPPMLP LNPNSPGNPL 201: QPLDSPLGGE SNRVPSSSSS PSPPSLSGSN NHSGGSNRHN ANSNGDGGTS QQSNESNYTE KTVIGIGIAG VLVILFIAGV FFVRRKQKKG SSSPRSNQYL 301: PPANVSVNTE GFIHYRQKPG NGNSSAQNSS PDTNSLGNPK HGRGTPDSAV IGTSKIHFTY EELSQITEGF CKSFVVGEGG FGCVYKGILF EGKPVAIKQL 401: KSVSAEGYRE FKAEVEIISR VHHRHLVSLV GYCISEQHRF LIYEFVPNNT LDYHLHGKNL PVLEWSRRVR IAIGAAKGLA YLHEDCHPKI IHRDIKSSNI 501: LLDDEFEAQV ADFGLARLND TAQSHISTRV MGTFGYLAPE YASSGKLTDR SDVFSFGVVL LELITGRKPV DTSQPLGEES LVEWARPRLI EAIEKGDISE 601: VVDPRLENDY VESEVYKMIE TAASCVRHSA LKRPRMVQVV RALDTRDDLS DLTNGVKVGQ SRVYDSGQYS NEIRIFRRAS EDSSDLGTNT GYYPSQDYAT 701: SHEYESESRA FNTSHRNH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)