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AT1G10522.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27137770 (2016): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IX99eggNOG:ENOG410YMJGEMBL:AC007067EMBL:AY086634
EMBL:BT030627EMBL:CP002684EnsemblPlants:AT1G10522EnsemblPlants:AT1G10522.1
EnsemblPlants:AT1G10522.2entrez:837593GeneID:837593GO:GO:0009642
GO:GO:0010468GO:GO:0042646Gramene:AT1G10522.1Gramene:AT1G10522.2
hmmpanther:PTHR35987hmmpanther:PTHR35987:SF2HOGENOM:HOG000215006KEGG:ath:AT1G10522
OMA:FREHMAWPhylomeDB:Q9XIK0Proteomes:UP000006548RefSeq:NP_001077502.1
RefSeq:NP_563872.1STRING:3702.AT1G10522.1TAIR:AT1G10522UniGene:At.42176
UniGene:At.42177UniProt:Q9XIK0
Coordinates (TAIR10) chr1:+:3470009..3471291
Molecular Weight (calculated) 20253.10 Da
IEP (calculated) 5.76
GRAVY (calculated) -0.28
Length 179 amino acids
Sequence (TAIR10)
(BLAST)
001: MASMHEALFS SRLLQVNSSF SFRCALPIIS SPAAVSCAIK STQFFKQRCR TKVRDFSLSS LSRRGFVCRA AEYKFPDPIP EFAEAETEKF RDHMLNKLSK
101: RDLFEDSVDE IVGVCTEIFE TFLRSEYGGP GTLLVIPFID MADTLNEREL PGGPQAARAA IKWAQDHVDK DWKEWTGTD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)