AT1G09740.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.873 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 5950 Blast hits to 5719 proteins in 1218 species: Archae - 487; Bacteria - 4382; Metazoa - 139; Fungi - 81; Plants - 701; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:3154603..3155834 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 18150.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.50 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.10 | ||||||||||||||||||||||||||||||||
| Length | 171 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVSGSLNCV VVAVDGSEVS MEALRWALDN LKLSSSSSDS SFVVLHVQPS PSVAAGVSPG TIPFGGPSGL EVPAFTAAIE QHQKRITDTI LEHASQICAE 101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)