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AT1G09350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : galactinol synthase 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
galactinol synthase 3 (GolS3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1260 Blast hits to 1259 proteins in 288 species: Archae - 0; Bacteria - 98; Metazoa - 258; Fungi - 282; Plants - 479; Viruses - 73; Other Eukaryotes - 70 (source: NCBI BLink).
Protein Annotations
BRENDA:2.4.1.123CAZy:GT8EC:2.4.1.123eggNOG:COG5597eggNOG:KOG1950EMBL:AB062850EMBL:AC003970
EMBL:AF370546EMBL:AY081452EMBL:CP002684EnsemblPlants:AT1G09350EnsemblPlants:AT1G09350.1entrez:837457ExpressionAtlas:O80518
Gene3D:3.90.550.10GeneID:837457Genevisible:O80518GO:GO:0005737GO:GO:0006012GO:GO:0006979GO:GO:0009409
GO:GO:0046872GO:GO:0047216Gramene:AT1G09350.1gramene_pathway:2.4.1.123gramene_pathway:PWY-5337gramene_plant_reactome:1119417gramene_plant_reactome:6874015
hmmpanther:PTHR11183hmmpanther:PTHR11183:SF59HOGENOM:HOG000240012InParanoid:O80518InterPro:IPR002495InterPro:IPR029044KEGG:ath:AT1G09350
KO:K18819OMA:LLDQGCVPaxDb:O80518Pfam:O80518Pfam:PF01501PhylomeDB:O80518PIR:F86226
PRIDE:O80518PRO:PR:O80518ProteinModelPortal:O80518Proteomes:UP000006548RefSeq:NP_172406.1SMR:O80518STRING:3702.AT1G09350.1
SUPFAM:SSF53448TAIR:AT1G09350tair10-symbols:AtGolS3tair10-symbols:GolS3UniGene:At.15716UniGene:At.67798UniProt:O80518
UniProt:W8PVD7
Coordinates (TAIR10) chr1:+:3019888..3021214
Molecular Weight (calculated) 38679.40 Da
IEP (calculated) 6.40
GRAVY (calculated) -0.41
Length 334 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPEMNNKLS YGEKKRAYVT FLAGTGDYVK GVVGLAKGLR KTKSKYPLVV AVLPDVPADH RRQLLDQGCV IKEIQPVYPP DNQTQFAMAY YVLNYSKLRI
101: WKFVEYSKLI YLDGDIQVFE NIDHLFDLPD GNFYAVKDCF CEKTWSHTPQ YKIGYCQQCP DKVTWPESEL GPKPPLYFNA GMFVYEPSLP TYYNLLETLK
201: VVPPTPFAEQ DFLNMYFKDI YKPIPPVYNL VLAMLWRHPE NIELNEAKVV HYCAAGAKPW RFTGQEGNME REDIKMLVEK WWDIYNDESL DYKNFNVHCG
301: QKEDVHRKPK TLPQFFTDLS EADVLQCAKA PSAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)