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AT1G09010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.993
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycoside hydrolase family 2 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycoside hydrolase family 2 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 5072 Blast hits to 5044 proteins in 1162 species: Archae - 18; Bacteria - 3983; Metazoa - 234; Fungi - 319; Plants - 43; Viruses - 2; Other Eukaryotes - 473 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G09010-MONOMERBRENDA:3.2.1.152CAZy:GH2EC:3.2.1.152eggNOG:COG3250eggNOG:KOG2230EMBL:AB122060
EMBL:AC000106EMBL:CP002684EnsemblPlants:AT1G09010EnsemblPlants:AT1G09010.1entrez:837422Gene3D:2.60.120.260Gene3D:2.60.40.320
Gene3D:3.20.20.80GeneID:837422Genevisible:Q75W54GO:GO:0005773GO:GO:0005975GO:GO:0033947Gramene:AT1G09010.1
hmmpanther:PTHR10066hmmpanther:PTHR10066:SF56HOGENOM:HOG000292044InParanoid:Q75W54InterPro:IPR006102InterPro:IPR006103InterPro:IPR008979
InterPro:IPR013781InterPro:IPR013812InterPro:IPR017853InterPro:IPR023232InterPro:IPR028787KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23
KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23KEGG:ath:AT1G09010KO:K18577OMA:GWDWIPAPANTHER:PTHR10066:SF56
PaxDb:Q75W54Pfam:PF00703Pfam:PF02836Pfam:PF02837Pfam:Q75W54PhylomeDB:Q75W54PIR:A86222
PRIDE:Q75W54PRO:PR:Q75W54PROSITE:PS00608ProteinModelPortal:Q75W54Proteomes:UP000006548RefSeq:NP_563833.2scanprosite:PS00608
SMR:Q75W54STRING:3702.AT1G09010.1SUPFAM:SSF49303SUPFAM:SSF49785SUPFAM:SSF51445TAIR:AT1G09010UniGene:At.48170
UniGene:At.70237UniProt:Q75W54
Coordinates (TAIR10) chr1:-:2895259..2899287
Molecular Weight (calculated) 107666.00 Da
IEP (calculated) 6.42
GRAVY (calculated) -0.31
Length 944 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEIGKTVLD FGWIAARSTE VDVNGVQLTT TNPPAISSES RWMEAAVPGT VLGTLVKNKA IPDPFYGLEN EAITDIADSG RDYYTFWFFT KFQCQRLLNQ
101: YVHLNFRAIN YSAQVFVNGH KTELPKGMFR RHTLDVTDIL HPESNLLALI VHPPDHPGTI PPEGGQGGDH EIGKDVAAQY VQGWDWICPI RDRNTGIWDE
201: VSISVTGPVR IIDPHLVSTF FDDYKRAYLH VTAELENKST WNTECSVNIQ ITAELENGVC LVEHLQTENV LIPAQGRIQH TFKPLYFYKP ELWWPNGMGK
301: QNLYDILITV VVNEFGESDS WMQPFGFRKI ESVIDSVTGG RLFKINGEPI FIRGGNWILS DGLLRLSKER YRTDIKFHAD MNMNMIRCWG GGLAERPEFY
401: HFCDIYGLLV WQEFWITGDV DGRGVPVSNP NGPLDHELFL LCARDTVKLL RNHPSLALWV GGNEQVPPKD INEALKQDLR LHSYFETQLL SDKDSDPSVY
501: LDGTRVYIQG SMWDGFADGK GNFTDGPYEI QYPEDFFKDT YYKYGFNPEV GSVGMPVAET IRATMPPEGW TIPLFKKGLD GFIKEVPNRM WDYHKYIPYS
601: NPGKVHDQIL MYGTPENLDD FCLKAQLVNY IQYRALFEGW SSQMWTKYTG VLIWKNQNPW TGLRGQFYDH LLDQTASFYG CRSAAEPVHV QLNLASYFVE
701: VVNTTSKELS DVAIEASVWD LDGNCPYYKV FKIVSAPPKK VVKISEFKYP KAANPKHVYF LLLKLYTVSD KAVISRNFYW LHLPGKNYTL LEPYRKKQIP
801: LKITCNAVMV GSRYELEVNV HNTSRANLAK NVVQEDEKRD LGLLQKLFSR CVVSADSNRG LKVVEMKGSD SGVAFFLRFS VHNAETEKQD TRILPVHYSD
901: NYFSLVPGES MSFKISFAAP TGMKKSPRVM LQGWNYPDRF SVFG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)