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AT1G08590.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.753
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich receptor-like protein kinase family protein
Curator
Summary (TAIR10)
similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888)
Computational
Description (TAIR10)
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, leaf; EXPRESSED DURING: LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 238620 Blast hits to 145276 proteins in 3605 species: Archae - 165; Bacteria - 22033; Metazoa - 74123; Fungi - 11983; Plants - 100762; Viruses - 458; Other Eukaryotes - 29096 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G08590-MONOMERBioGrid:22622EC:2.7.11.1eggNOG:COG0515eggNOG:COG4886eggNOG:ENOG410IJBEEMBL:AC003981
EMBL:CP002684EMBL:FJ708630EnsemblPlants:AT1G08590EnsemblPlants:AT1G08590.1entrez:837381Gene3D:3.80.10.10GeneID:837381
Genevisible:Q9FRS6GO:GO:0001944GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0010067GO:GO:0016021
GO:GO:0030154Gramene:AT1G08590.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF99HOGENOM:HOG000116551InParanoid:Q9FRS6InterPro:IPR000719
InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT1G08590
ncoils:CoilOMA:HNEREVMPaxDb:Q9FRS6Pfam:PF00069Pfam:PF08263Pfam:PF13855Pfam:Q9FRS6
Pfscan:PS50011PhylomeDB:Q9FRS6PIR:T00712PRIDE:Q9FRS6PRO:PR:Q9FRS6PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9FRS6Proteomes:UP000006548RefSeq:NP_172335.1scanprosite:PS00108SMART:SM00220SMART:SM00369SMR:Q9FRS6
STRING:3702.AT1G08590.1SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G08590TMHMM:TMhelixUniGene:At.16949
UniProt:Q9FRS6
Coordinates (TAIR10) chr1:+:2718859..2721948
Molecular Weight (calculated) 113827.00 Da
IEP (calculated) 6.48
GRAVY (calculated) -0.00
Length 1029 amino acids
Sequence (TAIR10)
(BLAST)
0001: MAIPRLFFLF YYIGFALFPF VSSETFQNSE QEILLAFKSD LFDPSNNLQD WKRPENATTF SELVHCHWTG VHCDANGYVA KLLLSNMNLS GNVSDQIQSF
0101: PSLQALDLSN NAFESSLPKS LSNLTSLKVI DVSVNSFFGT FPYGLGMATG LTHVNASSNN FSGFLPEDLG NATTLEVLDF RGGYFEGSVP SSFKNLKNLK
0201: FLGLSGNNFG GKVPKVIGEL SSLETIILGY NGFMGEIPEE FGKLTRLQYL DLAVGNLTGQ IPSSLGQLKQ LTTVYLYQNR LTGKLPRELG GMTSLVFLDL
0301: SDNQITGEIP MEVGELKNLQ LLNLMRNQLT GIIPSKIAEL PNLEVLELWQ NSLMGSLPVH LGKNSPLKWL DVSSNKLSGD IPSGLCYSRN LTKLILFNNS
0401: FSGQIPEEIF SCPTLVRVRI QKNHISGSIP AGSGDLPMLQ HLELAKNNLT GKIPDDIALS TSLSFIDISF NHLSSLSSSI FSSPNLQTFI ASHNNFAGKI
0501: PNQIQDRPSL SVLDLSFNHF SGGIPERIAS FEKLVSLNLK SNQLVGEIPK ALAGMHMLAV LDLSNNSLTG NIPADLGASP TLEMLNVSFN KLDGPIPSNM
0601: LFAAIDPKDL VGNNGLCGGV LPPCSKSLAL SAKGRNPGRI HVNHAVFGFI VGTSVIVAMG MMFLAGRWIY TRWDLYSNFA REYIFCKKPR EEWPWRLVAF
0701: QRLCFTAGDI LSHIKESNII GMGAIGIVYK AEVMRRPLLT VAVKKLWRSP SPQNDIEDHH QEEDEEDDIL REVNLLGGLR HRNIVKILGY VHNEREVMMV
0801: YEYMPNGNLG TALHSKDEKF LLRDWLSRYN VAVGVVQGLN YLHNDCYPPI IHRDIKSNNI LLDSNLEARI ADFGLAKMML HKNETVSMVA GSYGYIAPEY
0901: GYTLKIDEKS DIYSLGVVLL ELVTGKMPID PSFEDSIDVV EWIRRKVKKN ESLEEVIDAS IAGDCKHVIE EMLLALRIAL LCTAKLPKDR PSIRDVITML
1001: AEAKPRRKSV CQVAGDLPIF RNSPVVGLI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)