AT1G08500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : early nodulin-like protein 18 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
early nodulin-like protein 18 (ENODL18); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 799 Blast hits to 788 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 799; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:2689110..2689881 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 24905.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.09 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||
| Length | 228 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPSCSSCVN VLLIMCLMLL SLSADAYKNY TVGESTGWFD IQERPSANYQ KWADSKSFSL GDFLIFNTDS NHSVVQTYDF KTYKDCDYDN NENNDTTEWS 101: AANPSATSPV PVSISVPLVK EGSNYFFSGN YDGEQCKFGQ HFMINVTHGQ GLPDSSSPDD AAAPGPSESS QSGDDEVAPD TIVPANFDHP KDIESADDDK 201: EVHSKKSSSS TTKTSLFCFV FMGLFASF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)