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AT1G08320.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : bZIP transcription factor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 1141 Blast hits to 1141 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 49; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IH2BeggNOG:ENOG410YEKHEMBL:AJ314757EMBL:CP002684EMBL:HQ132743EnsemblPlants:AT1G08320EnsemblPlants:AT1G08320.1
EnsemblPlants:AT1G08320.3entrez:837353ExpressionAtlas:Q93XM6GeneID:837353GO:GO:0003700GO:GO:0006351GO:GO:0043565
Gramene:AT1G08320.1Gramene:AT1G08320.3hmmpanther:PTHR22952hmmpanther:PTHR22952:SF209InterPro:IPR004827InterPro:IPR025422ncoils:Coil
OMA:LHGMNAPPfam:PF00170Pfam:PF14144Pfscan:PS50217PhylomeDB:Q93XM6PROSITE:PS00036PROSITE:PS50217
Proteomes:UP000006548RefSeq:NP_001030999.1RefSeq:NP_563810.2scanprosite:PS00036SMART:SM00338SMR:Q93XM6STRING:3702.AT1G08320.1
SUPFAM:SSF57959TAIR:AT1G08320tair10-symbols:bZIP21tair10-symbols:TGA9UniGene:At.10454UniProt:Q93XM6
Coordinates (TAIR10) chr1:-:2622113..2627451
Molecular Weight (calculated) 53517.40 Da
IEP (calculated) 8.09
GRAVY (calculated) -0.53
Length 481 amino acids
Sequence (TAIR10)
(BLAST)
001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)