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AT1G07990.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.898
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SIT4 phosphatase-associated family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT2G28360.1); Has 1048 Blast hits to 891 proteins in 200 species: Archae - 0; Bacteria - 31; Metazoa - 354; Fungi - 329; Plants - 109; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XRM1eggNOG:KOG2073EMBL:AY127028EMBL:BT004535EMBL:CP002684EnsemblPlants:AT1G07990EnsemblPlants:AT1G07990.1
entrez:837314Gene3D:1.25.10.10GeneID:837314Gramene:AT1G07990.1hmmpanther:PTHR12634hmmpanther:PTHR12634:SF8InterPro:IPR007587
InterPro:IPR011989InterPro:IPR016024KEGG:ath:AT1G07990KO:K15501OMA:FDDDSAQPANTHER:PTHR12634Pfam:PF04499
PhylomeDB:Q8L7T5Proteomes:UP000006548RefSeq:NP_172277.2STRING:3702.AT1G07990.1SUPFAM:SSF48371TAIR:AT1G07990UniGene:At.27728
UniProt:Q8L7T5
Coordinates (TAIR10) chr1:+:2477413..2482898
Molecular Weight (calculated) 89593.80 Da
IEP (calculated) 4.20
GRAVY (calculated) -0.41
Length 802 amino acids
Sequence (TAIR10)
(BLAST)
001: MFWKLTSLSA SSPVEIILDK ENFTLEELLD EEEIIQECKA LNSRLINFLR DKAQVEQLLR YIVEEPPQDA DSKRAFKFPF ISCEIFTCEI DVILKTLVED
101: EELMNLLFSF LEPNRPHSAL LAGYFSKVVI CLMIRKTAAL MNYVKGHQNV FCQLVDLIGI TSIMEVLVRL VGADDQVYPN FLDVMQWLAD SNLLEMIVDK
201: LKPSSPPEVQ ANAAETLCAI SRNAPSALAT QLSSPGYVAK IFGHALEDSH SKSGLVHSLS VCTSLLDPRR SAVSSSMFNS YRGQHMFESP VPVSPETIGA
301: MLPKLNDLLM LLTVASDSTV LPTTYGELRP PLGKHRLKIV EFIAVLLKTR SEAAQKELVS SGTIKRTLDL FFEYPYNNAL HHQVESIILS CLENKSDLMV
401: NHILRDCDLI GKFLLSDRDS NLLGDSQPTV AASGKKKPRV GYVGHITRIS NKIGQLSNSN GQIKAYLQEN SEWNEWQGSV LQDRNTVENV NRWGCGRPTT
501: LQDRTRDSDE EDRDYDVAAL ANNLSQAFRY KIYGNDDNEE DHNALDRDDD DVYFDDESAE VVISSLRLGD DQGSLFTNSN WFTFQDDRFG STPSDTAGSN
601: TIDVELNKTY NANTSSSDDD EVVVGEEDDD LTGNPKDNAL NTTETNFQME SPLDFFDFNT SQKAEEAFAE QPPEWVGWGE PSDMQASGTG LNPFIDDDDD
701: DDSKHIMNLD IPMAEVKSES MIPNGSERSL FEKDVEFVGV EPEGAEKAME QAMKEGIVGE AGVMKKNKEM AEDSKPEESS GGVKEFNDNN YWKVDQEVGV
801: LE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)