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AT1G07650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat transmembrane protein kinase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1); Has 190432 Blast hits to 138472 proteins in 4783 species: Archae - 131; Bacteria - 16225; Metazoa - 53388; Fungi - 11706; Plants - 85318; Viruses - 481; Other Eukaryotes - 23183 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G07650-MONOMERBioCyc:ARA:GQT-1007-MONOMERBioGrid:22519EC:2.7.11.1eggNOG:COG4886eggNOG:ENOG410IFCUEMBL:AC007583
EMBL:AF370513EMBL:AK221671EMBL:BT000348EMBL:CP002684EMBL:FJ708629EnsemblPlants:AT1G07650EnsemblPlants:AT1G07650.1
entrez:837278ExpressionAtlas:C0LGE0Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:837278Genevisible:C0LGE0GO:GO:0004674
GO:GO:0005524GO:GO:0016021hmmpanther:PTHR27006hmmpanther:PTHR27006:SF37HOGENOM:HOG000116550InParanoid:C0LGE0InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR021720InterPro:IPR032675iPTMnet:C0LGE0PaxDb:C0LGE0Pfam:C0LGE0Pfam:PF07714Pfam:PF11721
Pfam:PF13855Pfscan:PS50011PhylomeDB:C0LGE0PIR:A86211PIR:B86211PRIDE:C0LGE0PRO:PR:C0LGE0
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:C0LGE0Proteomes:UP000006548RefSeq:NP_172244.2scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMART:SM00369SMR:C0LGE0STRING:3702.AT1G07650.2SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT1G07650TMHMM:TMhelixUniGene:At.14844UniProt:C0LGE0
Coordinates (TAIR10) chr1:-:2359817..2366423
Molecular Weight (calculated) 112908.00 Da
IEP (calculated) 8.82
GRAVY (calculated) -0.19
Length 1014 amino acids
Sequence (TAIR10)
(BLAST)
0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)