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AT1G07615.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GTP-binding protein Obg/CgtA
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GTP-binding protein Obg/CgtA; FUNCTIONS IN: magnesium ion binding, GTP binding, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP1/OBG family protein (TAIR:AT5G18570.1); Has 28571 Blast hits to 22114 proteins in 2954 species: Archae - 681; Bacteria - 18882; Metazoa - 872; Fungi - 715; Plants - 429; Viruses - 2; Other Eukaryotes - 6990 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0536eggNOG:KOG1489EMBL:AC007583EMBL:AC022464EMBL:BX816302EMBL:CP002684EnsemblPlants:AT1G07615
EnsemblPlants:AT1G07615.1entrez:5007670Gene3D:2.70.210.12Gene3D:3.40.50.300GeneID:5007670Genevisible:F4HSD4GO:GO:0000287
GO:GO:0003924GO:GO:0005525GO:GO:0005739Gramene:AT1G07615.1hmmpanther:PTHR11702hmmpanther:PTHR11702:SF31HOGENOM:HOG000019084
InParanoid:F4HSD4InterPro:IPR006073InterPro:IPR006169InterPro:IPR014100InterPro:IPR027417InterPro:IPR031167KEGG:ath:AT1G07615
ncoils:CoilOMA:KPTVGHYPaxDb:F4HSD4Pfam:F4HSD4Pfam:PF01018Pfam:PF01926Pfscan:PS51710
PIR:F86210PIRSF:PIRSF002401PRIDE:F4HSD4PRINTS:PR00326PRO:PR:F4HSD4PROSITE:PS51710ProteinModelPortal:F4HSD4
Proteomes:UP000006548RefSeq:NP_001077476.1SMR:F4HSD4STRING:3702.AT1G07615.1SUPFAM:SSF52540SUPFAM:SSF82051TAIR:AT1G07615
UniGene:At.71268UniProt:F4HSD4
Coordinates (TAIR10) chr1:-:2342277..2344200
Molecular Weight (calculated) 54303.20 Da
IEP (calculated) 5.03
GRAVY (calculated) -0.55
Length 493 amino acids
Sequence (TAIR10)
(BLAST)
001: MWLIRAIVPV RYLGSYKRPQ KPPWMRNPVV FYSDFSEKKG KVAPLQETRM RDRFTLYARG GEGGSGCSSV RRSRADRYGK PDGGNGGRGG DVILECTHAV
101: WDFSGLQPHI KGGKAGHGTS KNRIGNRGED KVLLVPIGTV IHLQEGEIPS QVENESPKDL DPWDLPGSLV EDPASEENSD VHQETMSESD QDDTEQESLT
201: RQLGMPKEAD FEDDDEEIDQ IRYNVAELTQ QGQRVIIARG GEGGLGNVSA TRYVRGSKFA KSTIRQTNLR SMEDDAEEDD ERSSIKAGLL GSEAVLILEL
301: KSIADVGLVG MPNAGKSTLL GALSRAKPRV GHYAFTTLRP NLGNVNYDDF SMTVADIPGL IKGAHQNRGL GHNFLRHIER TKVLAYVVDL ASGLDGCEGL
401: TPWQQLRDLV MELEFHEEGL SDRSSLIVAN KIDEEGAEER LKELKRRVKG VKIFPVCAVL EEGVAELKDG LKMLVDGNGE PSERLKLENI CVD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)