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AT1G07510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FTSH protease 10
Curator
Summary (TAIR10)
encodes an FtsH protease that is localized to the mitochondrion
Computational
Description (TAIR10)
FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink).
Protein Annotations
BioGrid:22506BRENDA:3.4.24.B20EC:3.4.24.-eggNOG:COG0465eggNOG:KOG0731EMBL:AC022464EMBL:AK230173
EMBL:AY064138EMBL:AY124808EMBL:CP002684EnsemblPlants:AT1G07510EnsemblPlants:AT1G07510.1entrez:837265Gene3D:3.40.50.300
GeneID:837265Genevisible:Q8VZI8GO:GO:0004176GO:GO:0004222GO:GO:0005524GO:GO:0005739GO:GO:0005743
GO:GO:0006461GO:GO:0008053GO:GO:0008237GO:GO:0008270GO:GO:0009535GO:GO:0009536GO:GO:0016021
GO:GO:0034982GO:GO:0042407GO:GO:0045041Gramene:AT1G07510.1HAMAP:MF_01458hmmpanther:PTHR23076hmmpanther:PTHR23076:SF69
HOGENOM:HOG000217277InParanoid:Q8VZI8InterPro:IPR000642InterPro:IPR003593InterPro:IPR003959InterPro:IPR003960InterPro:IPR005936
InterPro:IPR011546InterPro:IPR027417iPTMnet:Q8VZI8KEGG:ath:AT1G07510KO:K08956MEROPS:M41.023OMA:PQREDEF
PaxDb:Q8VZI8Pfam:PF00004Pfam:PF01434Pfam:PF06480Pfam:Q8VZI8PhylomeDB:Q8VZI8PIR:H86209
PRIDE:Q8VZI8PRO:PR:Q8VZI8PROSITE:PS00674ProteinModelPortal:Q8VZI8Proteomes:UP000006548RefSeq:NP_172231.2scanprosite:PS00674
SMART:SM00382SMR:Q8VZI8STRING:3702.AT1G07510.1SUPFAM:SSF140990SUPFAM:SSF52540TAIR:AT1G07510tair10-symbols:ftsh10
TIGRfam:TIGR01241TIGRFAMs:TIGR01241UniGene:At.23339UniProt:Q8VZI8
Coordinates (TAIR10) chr1:+:2305689..2309380
Molecular Weight (calculated) 89559.80 Da
IEP (calculated) 8.65
GRAVY (calculated) -0.40
Length 813 amino acids
Sequence (TAIR10)
(BLAST)
001: MIFSKLGSSL ARSSRSKGFV YGGGVRSAVF NQGRLRAPQN LEAAVNQVDG GLGFLRRHFA SFAARKGLEA GDLSRAFANP RLRRFFSSQT PKKKNYENYY
101: PKDSKKAPKN EQKSESRDGS KKNENENAGD AFSNEYQNML IPLMAIALIL STFSLGSREQ QQISFQEFKN KLLEAGLVDH IDVSNKEVAK VYVRSSPKSQ
201: TTEEVVQGPG NGVPAKGRGG QYKYYFNIGS VESFEEKLEE AQEAIGVNSH DFVPVTYVSE TIWYQELLRF APTLLLVATL IFGARRMQGG LGGLGGPGGK
301: AGRGIFNIGK AQITRADKNS KNKIYFKDVA GCEEAKQEIM EFVHFLQNPK KYEDLGAKIP KGALLVGPPG TGKTLLAKAT AGESAVPFLS ISGSDFMEMF
401: VGVGPSRVRN LFQEARQCAP SIIFIDEIDA IGRARGRGGF SGGNDEREST LNQLLVEMDG FGTTAGVVVL AGTNRPDILD KALLRPGRFD RQITIDKPDI
501: KGRDQIFQIY LKKIKLDHEP SYYSQRLAAL TPGFAGADIA NVCNEAALIA ARHEGATVTM AHFDSAIDRV IGGLEKKNRV ISKLERRTVA YHESGHAVAG
601: WFLEHAEPLL KVTIVPRGTA ALGFAQYVPN ENLLMTKEQL FDMTCMTLGG RAAEQVLIGR ISTGAQNDLE KVTKMTYAQV AVYGFSDKIG LLSFPQREDE
701: FSKPYSNRTG AMIDEEVREW VGKAYKRTVE LIEEHKEQVA QIAELLLEKE VLHQDDLTKV LGERPFKSGE TTNYDRFKSG FEESEKESQK ESVPVKPVED
801: DGIPPLEPQV VPT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)