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AT1G07485.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.919
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis, D bilateral stage; Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AK176873EMBL:CP002684EnsemblPlants:AT1G07485EnsemblPlants:AT1G07485.1
entrez:5007669GeneID:5007669Gramene:AT1G07485.1HOGENOM:HOG000214995
KEGG:ath:AT1G07485OMA:YLGIMFMProteomes:UP000006548RefSeq:NP_001077475.1
TAIR:AT1G07485UniGene:At.67885UniProt:Q67XE6
Coordinates (TAIR10) chr1:+:2301505..2301892
Molecular Weight (calculated) 11605.10 Da
IEP (calculated) 3.92
GRAVY (calculated) -0.62
Length 100 amino acids
Sequence (TAIR10)
(BLAST)
1: MHEIYIYLGI MFMPTYKHSH TPSHDIEDDE DEGTEHLVDE LRTNAGAFEE EALVEKLLEN LDLDEVEEDE HDAANASFFD SLHFSSIFVL QKREGENESF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)