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AT1G07430.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : highly ABA-induced PP2C gene 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
highly ABA-induced PP2C gene 2 (HAI2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6753 Blast hits to 6737 proteins in 407 species: Archae - 6; Bacteria - 193; Metazoa - 1700; Fungi - 794; Plants - 2782; Viruses - 7; Other Eukaryotes - 1271 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G07430-MONOMERBioGrid:22496DIP:DIP-40200NEC:3.1.3.16eggNOG:COG0631eggNOG:KOG0698EMBL:AC022464
EMBL:AY070089EMBL:AY084794EMBL:AY091341EMBL:CP002684EnsemblPlants:AT1G07430EnsemblPlants:AT1G07430.1entrez:837255
Gene3D:3.60.40.10GeneID:837255Genevisible:Q9LNW3GO:GO:0004722GO:GO:0005267GO:GO:0005886GO:GO:0009788
GO:GO:0009939GO:GO:0010030GO:GO:0046872GO:GO:0048838GO:GO:1902039Gramene:AT1G07430.1hmmpanther:PTHR13832
hmmpanther:PTHR13832:SF219HOGENOM:HOG000233896InParanoid:Q9LNW3IntAct:Q9LNW3InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655
iPTMnet:Q9LNW3KEGG:ath:AT1G07430KO:K14497OMA:MSANCRCPANTHER:PTHR13832PaxDb:Q9LNW3Pfam:PF00481
Pfam:Q9LNW3Pfscan:PS51746PhylomeDB:Q9LNW3PIR:B86209PRIDE:Q9LNW3PRO:PR:Q9LNW3PROSITE:PS01032
PROSITE:PS51746ProteinModelPortal:Q9LNW3Proteomes:UP000006548RefSeq:NP_172223.1scanprosite:PS01032SMART:SM00332SMR:Q9LNW3
STRING:3702.AT1G07430.1SUPFAM:SSF81606TAIR:AT1G07430tair10-symbols:HAI2UniGene:At.28399UniProt:Q9LNW3
Coordinates (TAIR10) chr1:-:2281151..2282656
Molecular Weight (calculated) 49765.40 Da
IEP (calculated) 6.16
GRAVY (calculated) -0.73
Length 442 amino acids
Sequence (TAIR10)
(BLAST)
001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)