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AT1G07190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.670
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BEST Arabidopsis thaliana protein match is: lon protease 1 (TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in 47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0466eggNOG:KOG2004EMBL:CP002684EnsemblPlants:AT1G07190EnsemblPlants:AT1G07190.1entrez:837230GeneID:837230
Gramene:AT1G07190.1KEGG:ath:AT1G07190PaxDb:F4HQJ7PRIDE:F4HQJ7ProteinModelPortal:F4HQJ7Proteomes:UP000006548RefSeq:NP_172199.1
SMR:F4HQJ7STRING:3702.AT1G07190.1TAIR:AT1G07190UniGene:At.51511UniProt:F4HQJ7
Coordinates (TAIR10) chr1:+:2208013..2208177
Molecular Weight (calculated) 6110.46 Da
IEP (calculated) 9.22
GRAVY (calculated) -0.22
Length 54 amino acids
Sequence (TAIR10)
(BLAST)
1: MTGRLTLTGK ILGSLVKTII FPEADRRDVD ELPNNGKEGI HVFTLWMNMS RYSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)