suba logo
AT1G07000.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 0.946
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : exocyst subunit exo70 family protein B2
Curator
Summary (TAIR10)
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational
Description (TAIR10)
exocyst subunit exo70 family protein B2 (EXO70B2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, plasma membrane, exocyst; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein B1 (TAIR:AT5G58430.1); Has 788 Blast hits to 778 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 10; Plants - 642; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410YIGIeggNOG:KOG2344EMBL:AC067971EMBL:AY075660EMBL:AY101526EMBL:CP002684EnsemblPlants:AT1G07000
EnsemblPlants:AT1G07000.1entrez:837210GeneID:837210GO:GO:0000145GO:GO:0005634GO:GO:0005829GO:GO:0005886
GO:GO:0006887GO:GO:0070062Gramene:AT1G07000.1hmmpanther:PTHR12542hmmpanther:PTHR12542:SF29HOGENOM:HOG000238421IntAct:Q9LMJ4
InterPro:IPR004140InterPro:IPR016159KEGG:ath:AT1G07000KO:K07195OMA:NGRRGEPPANTHER:PTHR12542Pfam:PF03081
PhylomeDB:Q9LMJ4PIR:G86204Proteomes:UP000006548Reactome:R-ATH-5620916RefSeq:NP_172181.1SMR:Q9LMJ4STRING:3702.AT1G07000.1
SUPFAM:SSF74788TAIR:AT1G07000tair10-symbols:ATEXO70B2tair10-symbols:EXO70B2UniGene:At.43622UniProt:Q9LMJ4
Coordinates (TAIR10) chr1:-:2150398..2152305
Molecular Weight (calculated) 67718.50 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.32
Length 599 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEAGDENLY AAARDIARAL GKDPSAAGDI LQILSGYGAS GNRGGDPRPT PSRGGSNVNF DRALTSLERQ ISSYIVEDRP IWSDPVDSRT FLDSVDELLA
101: IAGDLRSMAG DKSVAVCQSR ADELIQQVMF RLQEEFGFVM DRAPDSFDSD DEFPGEEDND TSDGVIVARP ITDYKIVIEA LQSSVIGDLN AIAVRMVAGG
201: FAKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQESPWQ DLEDEIDRWI KAVTLIFHVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA
301: DAIALGSRLP ERLFKVVDLY EAMQDLIPKM ETLFSDRYCS PLRHEALAIH KRLGEAIRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR
401: QSLEQILDQT GNETGSDTRP LSVQIIWVLE LLESNLEGKK RTYRDPSLCF LFMMNNDKYI LDKAKDNELG LVLGEDWIVK HAAKLRQYHS NYRRSSWNQV
501: VGLLRTDGPY PKLVENLRLF KSQFDEVCKV QSQWVVSDGQ LREELRSSVA GIVSPAYSNF IRRLKESPEI NGRRGEPFIP YTVEDVEFII KRLFKESSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)