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AT1G06780.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.898
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : galacturonosyltransferase 6
Curator
Summary (TAIR10)
Encodes a protein with putative galacturonosyltransferase activity.
Computational
Description (TAIR10)
galacturonosyltransferase 6 (GAUT6); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: los glycosyltransferase 5 (TAIR:AT2G30575.1); Has 1389 Blast hits to 1379 proteins in 238 species: Archae - 0; Bacteria - 400; Metazoa - 143; Fungi - 0; Plants - 830; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-339-MONOMERCAZy:GT8EC:2.4.1.-eggNOG:ENOG410IKF8
eggNOG:ENOG410YA0PEMBL:AC011001EMBL:AY045900EMBL:AY091452
EMBL:CP002684EnsemblPlants:AT1G06780EnsemblPlants:AT1G06780.1entrez:837189
ExpressionAtlas:Q9M9Y5Gene3D:3.90.550.10GeneID:837189Genevisible:Q9M9Y5
GO:GO:0000139GO:GO:0016021GO:GO:0045489GO:GO:0047262
GO:GO:0071555gramene_pathway:2.4.1.43gramene_pathway:PWY-1061hmmpanther:PTHR32116
hmmpanther:PTHR32116:SF0HOGENOM:HOG000239479InParanoid:Q9M9Y5InterPro:IPR002495
InterPro:IPR029044InterPro:IPR029993KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-
KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-
KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-
KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-ncoils:Coil
PANTHER:PTHR32116PaxDb:Q9M9Y5Pfam:PF01501Pfam:Q9M9Y5
PhylomeDB:Q9M9Y5PIR:F86202PRIDE:Q9M9Y5PRO:PR:Q9M9Y5
ProteinModelPortal:Q9M9Y5Proteomes:UP000006548RefSeq:NP_563771.1STRING:3702.AT1G06780.2
SUPFAM:SSF53448TAIR:AT1G06780tair10-symbols:GAUT6TMHMM:TMhelix
UniGene:At.12086UniPathway:UPA00845UniProt:Q9M9Y5UniProt:W8PW41
Coordinates (TAIR10) chr1:+:2083689..2086853
Molecular Weight (calculated) 67540.30 Da
IEP (calculated) 9.85
GRAVY (calculated) -0.40
Length 589 amino acids
Sequence (TAIR10)
(BLAST)
001: MKQIRRWQRI LILALLSISV FAPLIFVSNR LKSITPVGRR EFIEELSKIR FTTNDLRLSA IEHEDGEGLK GPRLILFKDG EFNSSAESDG GNTYKNREEQ
101: VIVSQKMTVS SDEKGQILPT VNQLANKTDF KPPLSKGEKN TRVQPDRATD VKTKEIRDKI IQAKAYLNFA PPGSNSQVVK ELRGRLKELE RSVGDATKDK
201: DLSKGALRRV KPMENVLYKA SRVFNNCPAI ATKLRAMNYN TEEQVQAQKN QAAYLMQLAA RTTPKGLHCL SMRLTSEYFS LDPEKRQMPN QQNYFDANFN
301: HYVVFSDNVL ASSVVVNSTI SSSKEPERIV FHVVTDSLNY PAISMWFLLN IQSKATIQIL NIDDMDVLPR DYDQLLMKQN SNDPRFISTL NHARFYLPDI
401: FPGLNKMVLL DHDVVVQRDL SRLWSIDMKG KVVGAVETCL EGESSFRSMS TFINFSDTWV AGKFSPRACT WAFGMNLIDL EEWRIRKLTS TYIKYFNLGT
501: KRPLWKAGSL PIGWLTFYRQ TLALDKRWHV MGLGRESGVK AVDIEQAAVI HYDGVMKPWL DIGKENYKRY WNIHVPYHHT YLQQCNLQA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)