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AT1G06590.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.980
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 380 Blast hits to 268 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Protein Annotations
BioGrid:22411DNASU:837170eggNOG:ENOG410YVZNeggNOG:KOG4322EMBL:AC007592EMBL:AK176366EMBL:AY138229
EMBL:CP002684EnsemblPlants:AT1G06590EnsemblPlants:AT1G06590.1entrez:837170Gene3D:1.25.40.10GeneID:837170Genevisible:Q8H1U4
GO:GO:0005634GO:GO:0007067GO:GO:0016567GO:GO:0051301Gramene:AT1G06590.1hmmpanther:PTHR12830hmmpanther:PTHR12830:SF9
HOGENOM:HOG000085137InParanoid:Q8H1U4IntAct:Q8H1U4InterPro:IPR011990InterPro:IPR026000iPTMnet:Q8H1U4KEGG:ath:AT1G06590
KO:K03352ncoils:CoilOMA:HFGHPKQPaxDb:Q8H1U4Pfam:PF12862Pfam:Q8H1U4PhylomeDB:Q8H1U4
PIR:C86201PRIDE:Q8H1U4PRO:PR:Q8H1U4ProteinModelPortal:Q8H1U4Proteomes:UP000006548RefSeq:NP_172146.2SMR:Q8H1U4
STRING:3702.AT1G06590.1TAIR:AT1G06590UniGene:At.42333UniPathway:UPA00143UniProt:Q8H1U4
Coordinates (TAIR10) chr1:-:2016504..2024505
Molecular Weight (calculated) 101045.00 Da
IEP (calculated) 6.17
GRAVY (calculated) -0.02
Length 916 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGLTRTAGA FAVTPHKISV CILLQIYAPS AQMSLPFPFS SVAQHNRLGL YLLSLTKSCD DIFEPKLEKL INQLREVGEE MDAWLTDHLT NRFSSLASPD
101: DLLNFFNDMR GILGSLDSGV VQDDQIILDP NSNLGMFVRR CILAFNLLSF EGVCHLFSSI EDYCKEAHSS FAQFGAPNNN LESLIQYDQM DMENYAMDKP
201: TEEIEFQKTA SGIVPFHLHT PDSLMKATEG LLHNRKETSR TSKKDTEATP VARASTSTLE ESLVDESLFL RTNLQIQGFL MEQADAIEIH GSSSSFSSSS
301: IESFLDQLQK LAPELHRVHF LRYLNKLHSD DYFAALDNLL RYFDYSAGTE GFDLVPPSTG CSMYGRYEIG LLCLGMMHFR FGHPNLALEV LTEAVRVSQQ
401: LSNDTCLAYT LAAMSNLLSE MGIASTSGVL GSSYSPVTST ASSLSVQQRV YILLKESLRR ADSLKLRRLV ASNHLAMAKF ELMHVQRPLL SFGPKASMRH
501: KTCPVSVCKE IRLGAHLISD FSSESSTMTI DGSLSSAWLK DLQKPWGPPV ISPDSGSRKS STFFQLCDHL VSIPGSVSQL IGASYLLRAT SWELYGSAPM
601: ARMNTLVYAT LFGDSSSSSD AELAYLKLIQ HLALYKGYKD AFAALKVAEE KFLTVSKSKV LLLKLQLLHE RALHCGNLKL AQRICNELGG LASTAMGVDM
701: ELKVEASLRE ARTLLAAKQY SQAANVAHSL FCTCHKFNLQ IEKASVLLLL AEIHKKSGNA VLGLPYALAS ISFCQSFNLD LLKASATLTL AELWLGLGSN
801: HTKRALDLLH GAFPMILGHG GLELRARAYI FEANCYLSDP SSSVSTDSDT VLDSLRQASD ELQALEYHEL AAEASYLMAM VYDKLGRLDE REEAASLFKK
901: HIIALENPQD VEQNMA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)