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AT1G06510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 376 Blast hits to 369 proteins in 152 species: Archae - 5; Bacteria - 113; Metazoa - 105; Fungi - 46; Plants - 27; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IW55eggNOG:ENOG41128PUEMBL:BT002812EMBL:BT004362
EMBL:CP002684EnsemblPlants:AT1G06510EnsemblPlants:AT1G06510.1entrez:837162
GeneID:837162GO:GO:0009507Gramene:AT1G06510.1hmmpanther:PTHR37174
HOGENOM:HOG000147068IntAct:Q84K72KEGG:ath:AT1G06510ncoils:Coil
OMA:IICKEANPhylomeDB:Q84K72Proteomes:UP000006548RefSeq:NP_172138.2
STRING:3702.AT1G06510.1TAIR:AT1G06510UniGene:At.42337UniProt:Q84K72
Coordinates (TAIR10) chr1:+:1992389..1993583
Molecular Weight (calculated) 30809.50 Da
IEP (calculated) 4.79
GRAVY (calculated) -0.43
Length 277 amino acids
Sequence (TAIR10)
(BLAST)
001: MVTTTIGGVP VVIAQSRRIP TSLRCFSATA NSDLLRSQLD RLHAEAESTR AKANSNRLRL LRLSEAAENL REQAAVNVRT GKENDARDLL LQKKKVMQAL
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)