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AT1G06460.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alpha-crystallin domain 32.1
Curator
Summary (TAIR10)
ACD32.1 encodes an alpha-crystallin domain containing protein with homology to small heat shock proteins.
Computational
Description (TAIR10)
alpha-crystallin domain 32.1 (ACD32.1); INVOLVED IN: response to heat; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 3590 Blast hits to 3590 proteins in 1004 species: Archae - 36; Bacteria - 2284; Metazoa - 1; Fungi - 156; Plants - 751; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0071eggNOG:KOG0710EMBL:BT025652EMBL:CP002684EMBL:DQ403189EnsemblPlants:AT1G06460EnsemblPlants:AT1G06460.1
entrez:837158Gene3D:2.60.40.790GeneID:837158GO:GO:0005777Gramene:AT1G06460.1hmmpanther:PTHR11527hmmpanther:PTHR11527:SF134
IntAct:Q208N7InterPro:IPR002068InterPro:IPR008978InterPro:IPR031107KEGG:ath:AT1G06460OMA:FMRQASTPANTHER:PTHR11527
Pfam:PF00011Pfscan:PS01031PhylomeDB:Q208N7ProMEX:Q208N7PROSITE:PS01031Proteomes:UP000006548RefSeq:NP_172134.1
SMR:Q208N7STRING:3702.AT1G06460.1SUPFAM:SSF49764TAIR:AT1G06460tair10-symbols:ACD31.2tair10-symbols:ACD32.1UniGene:At.24926
UniGene:At.66805UniProt:Q208N7
Coordinates (TAIR10) chr1:-:1967308..1969414
Molecular Weight (calculated) 31223.90 Da
IEP (calculated) 9.82
GRAVY (calculated) -0.34
Length 285 amino acids
Sequence (TAIR10)
(BLAST)
001: MEHESITARR RLAAFAAHFP ATSYDSASTA SLVPLNCSSS LNTVIQRCDN KISFARQASS EQGFFMRPAS PDDVLENLGM NLKNTVVRRG DNRLYFARQA
101: SSAQGFFMRQ ASTNERTIPH DAAASTKFSA TKTTGFDSSS PAYAAPHFSK PAKEDIFFPS LSPNLQKERP KLDLPKLANL GTVWSPRSNV AESTHSYVVA
201: IELPGASIND IRVEVDNTNL TVTGRRTSIC QKVDAGTKAS ILGYHKQEIL QGPFKVSWPL PSNVNKDNVS AEFMDGILRI VIPKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)