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AT1G05690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.720
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BTB and TAZ domain protein 3
Curator
Summary (TAIR10)
BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.
Computational
Description (TAIR10)
BTB and TAZ domain protein 3 (BT3); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 4 (TAIR:AT5G67480.2); Has 1903 Blast hits to 1903 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 1048; Fungi - 0; Plants - 775; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Protein Annotations
BioGrid:22318eggNOG:COG5076eggNOG:KOG1778EMBL:AC007153EMBL:AY316676EMBL:BX813844EMBL:CP002684
EnsemblPlants:AT1G05690EnsemblPlants:AT1G05690.1entrez:837076Gene3D:1.20.1020.10GeneID:837076Genevisible:Q9SYL0GO:GO:0003712
GO:GO:0004402GO:GO:0005516GO:GO:0005634GO:GO:0006355GO:GO:0008270GO:GO:0009409GO:GO:0009553
GO:GO:0009555GO:GO:0009651GO:GO:0009723GO:GO:0009751GO:GO:0016567GO:GO:0042542hmmpanther:PTHR24413
hmmpanther:PTHR24413:SF140HOGENOM:HOG000239221InParanoid:Q9SYL0IntAct:Q9SYL0InterPro:IPR000197InterPro:IPR000210InterPro:IPR011333
KEGG:ath:AT1G05690OMA:ACNFPACPaxDb:Q9SYL0Pfam:PF00651Pfam:PF02135Pfam:Q9SYL0Pfscan:PS50097
Pfscan:PS50134PhylomeDB:Q9SYL0PIR:B86191PRIDE:Q9SYL0PRO:PR:Q9SYL0PROSITE:PS50097PROSITE:PS50134
ProteinModelPortal:Q9SYL0Proteomes:UP000006548RefSeq:NP_172060.2SMART:SM00225SMART:SM00551STRING:3702.AT1G05690.1SUPFAM:SSF54695
SUPFAM:SSF57933TAIR:AT1G05690tair10-symbols:BT3UniGene:At.49855UniPathway:UPA00143UniProt:Q9SYL0
Coordinates (TAIR10) chr1:+:1707809..1709132
Molecular Weight (calculated) 41526.60 Da
IEP (calculated) 9.06
GRAVY (calculated) -0.31
Length 364 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSTKNIPK PPPLPCITYQ RFQSSTRKPS SLMRLVPKEA LETWDKLFKE GSGADTYVET DNKSHFPAHS SVLAAASPVI ATLLNQSRDK NGNTYLKIHG
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)