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AT1G05510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF1264)
Curator
Summary (TAIR10)
Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT2G31985.1); Has 295 Blast hits to 295 proteins in 126 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 67; Plants - 102; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
DNASU:837053eggNOG:ENOG410IFZ2eggNOG:ENOG410XPKSEMBL:AC005106EMBL:AK226452EMBL:AY070405EMBL:AY096580
EMBL:CP002684EnsemblPlants:AT1G05510EnsemblPlants:AT1G05510.1entrez:837053GeneID:837053GO:GO:0005811GO:GO:0009737
GO:GO:0009793GO:GO:0010344GO:GO:0019915Gramene:AT1G05510.1hmmpanther:PTHR31360hmmpanther:PTHR31360:SF0HOGENOM:HOG000176802
IntAct:Q9ZVY7InterPro:IPR010686KEGG:ath:AT1G05510OMA:KKLWHTHPfam:PF06884PhylomeDB:Q9ZVY7ProMEX:Q9ZVY7
Proteomes:UP000006548RefSeq:NP_172042.1STRING:3702.AT1G05510.1TAIR:AT1G05510UniGene:At.20860UniGene:At.28368UniProt:Q9ZVY7
Coordinates (TAIR10) chr1:+:1629527..1630690
Molecular Weight (calculated) 27294.90 Da
IEP (calculated) 6.70
GRAVY (calculated) -0.41
Length 241 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKAVHLSTK NGPKVPGEPT KTGTSMVDTA ASAVQSFAPI NQIHQHLCAF HFYAYDMTRQ VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVTEKL
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR
201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)